myRT

myRT report for GCA_900058565.1_10771_3_18

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Seq: FJDH01000007.1 (160207 bp)
Overview 1 RT 1: 47163-52096 bp Neighborhood of RT #1 [47163, 52110] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47163-47537 bp Feature: domain Description: Tra_M Location: 47211-47406 bp Feature: domain Description: Tra_M Location: 4721 1 -47406 bp Feature: gene Location: 47997-48149 bp Feature: gene Location: 48385-49905 bp Feature: domain Description: RVT_N Location: 48442-48685 bp Feature: domain Description: RVT_N Location: 48442-48685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48730-49354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48730-49354 bp Feature: domain Description: GIIM Note: maturase Location: 49405-49639 bp Feature: domain Description: GIIM Note: maturase Location: 49405-49639 bp Feature: gene Location: 49976-51427 bp Feature: domain Description: Tnp_DNA_bind Location: 50015-50183 bp Feature: domain Description: Tnp_DNA_bind Location: 5001 5-501 83 bp Feature: domain Description: DDE_Tnp_1 Location: 50840-51134 bp Feature: domain Description: DDE_Tnp_1 Location: 50840-51 1 34 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51140-51419 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51 1 40-51 41 9 bp Feature: gene Location: 51733-52110 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51760-52096 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51 760-52096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: FJDH01000015.1 (82207 bp)
Overview 1 RT 1: 22583-28503 bp Neighborhood of RT #1 [22583, 28577] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 22583-22855 bp Feature: gene Location: 23183-23548 bp Feature: domain Description: DUF5338 Location: 23192-23399 bp Feature: domain Description: DUF5338 Location: 2 3192 -2 3399 bp Feature: gene Location: 23853-26942 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24363-24891 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 4363-2 4891 bp Feature: gene Location: 27039-27209 bp Feature: gene Location: 27315-28577 bp Feature: domain Description: Arm-DNA-bind_3 Location: 27366-27618 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 7366-2 7618 bp Feature: domain Description: INT_P4_C Location: 27972-28503 bp Feature: domain Description: INT_P4_C Location: 2 7972 -2 8503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)