myRT

myRT report for GCA_900058575.1_10771_3_19

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Seq: FJDG01000007.1 (160071 bp)
Overview 1 RT 1: 108093-112909 bp Neighborhood of RT #1 [108093, 113040] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 108093-108470 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 108120-108456 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 1 081 20-1 08456 bp Feature: gene Location: 108776-110227 bp Feature: domain Description: Tnp_DNA_bind Location: 108815-108983 bp Feature: domain Description: Tnp_DNA_bind Location: 1 0881 5-1 08983 bp Feature: domain Description: DDE_Tnp_1 Location: 109640-109934 bp Feature: domain Description: DDE_Tnp_1 Location: 1 09640-1 09934 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 109940-110219 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1 09940-1 1 021 9 bp Feature: gene Location: 110298-111818 bp Feature: domain Description: RVT_N Location: 110355-110598 bp Feature: domain Description: RVT_N Location: 1 1 0355-1 1 0598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110643-111267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0643-1 1 1 267 bp Feature: domain Description: GIIM Note: maturase Location: 111318-111552 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 31 8-1 1 1 552 bp Feature: gene Location: 112054-112206 bp Feature: gene Location: 112666-113040 bp Feature: domain Description: Tra_M Location: 112714-112909 bp Feature: domain Description: Tra_M Location: 1 1 271 4-1 1 2909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261)

Seq: FJDG01000015.1 (82012 bp)
Overview 1 RT 1: 21075-26995 bp Neighborhood of RT #1 [21075, 27069] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 21075-21347 bp Feature: gene Location: 21675-22040 bp Feature: domain Description: DUF5338 Location: 21684-21891 bp Feature: domain Description: DUF5338 Location: 2 1684-2 1891 bp Feature: gene Location: 22345-25434 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22855-23383 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 2 855-2 3383 bp Feature: gene Location: 25531-25701 bp Feature: gene Location: 25807-27069 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25858-26110 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 5858-2 6110 bp Feature: domain Description: INT_P4_C Location: 26464-26995 bp Feature: domain Description: INT_P4_C Location: 2 6464-2 6995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)