myRT

myRT report for GCA_900066075.1_12718_7_94

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Seq: FMDQ01000005.1 (167550 bp)
Overview 1 RT 1: 8645-14122 bp Neighborhood of RT #1 [8645, 14130] RVT-GII GIIM ClC_sycA_like RocR Feature: gene Location: 8645-8782 bp Feature: gene Location: 8945-9304 bp Feature: gene Location: 9467-10786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9713-10328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971 3-1 0328 bp Feature: domain Description: GIIM Note: maturase Location: 10394-10604 bp Feature: domain Description: GIIM Note: maturase Location: 1 0394-1 0604 bp Feature: gene Location: 10873-12150 bp Feature: domain Description: ClC_sycA_like Location: 10981-12088 bp Feature: domain Description: ClC_sycA_like Location: 1 0981 -1 2088 bp Feature: gene Location: 12337-14130 bp Feature: domain Description: RocR Location: 12385-14122 bp Feature: domain Description: RocR Location: 1 2385-1 41 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ClC_sycA_like (cd03682), RocR (COG3829)

Seq: FMDQ01000039.1 (7351 bp)
Overview 1 RT 1: 3-1186 bp Neighborhood of RT #1 [3, 1491] RVT-GII pepcterm_ATPase rve_3 Feature: gene Location: 3-146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-84 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-84 bp Feature: gene Location: 248-1072 bp Feature: domain Description: pepcterm_ATPase Location: 278-1061 bp Feature: domain Description: pepcterm_ATPase Location: 2 78-1061 bp Feature: gene Location: 1054-1491 bp Feature: domain Description: rve_3 Location: 1078-1186 bp Feature: domain Description: rve_3 Location: 1078-1186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pepcterm_ATPase (TIGR03015), rve_3 (pfam13683)

Seq: FMDQ01000002.1 (373092 bp)
Overview 1 RT 1: 53600-57757 bp 2 RT 2: 368338-373091 bp Neighborhood of RT #1 [53600, 57768] rSAM_mob_pairB rSAM_mob_pairB RVT-GII ParAB_family COG3943 Neighborhood of RT #2 [368338, 373091] PRK11413 CdaR RVT-GII GIIM Feature: gene Location: 53600-53959 bp Feature: domain Description: rSAM_mob_pairB Location: 53603-53774 bp Feature: domain Description: rSAM_mob_pairB Location: 53 603 -53 774 bp Feature: domain Description: rSAM_mob_pairB Location: 53777-53933 bp Feature: domain Description: rSAM_mob_pairB Location: 53 777-53 93 3 bp Feature: gene Location: 54181-54360 bp Feature: gene Location: 54450-55379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54705-55335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54705-553 3 5 bp Feature: gene Location: 55463-56503 bp Feature: domain Description: ParAB_family Location: 55478-56207 bp Feature: domain Description: ParAB_family Location: 55478-56207 bp Feature: gene Location: 56776-57768 bp Feature: domain Description: COG3943 Location: 56797-57757 bp Feature: domain Description: COG3 943 Location: 56797-57757 bp Feature: gene Location: 368338-370626 bp Feature: domain Description: PRK11413 Location: 368341-370621 bp Feature: domain Description: PRK11413 Location: 3 683 41-3 70621 bp Feature: gene Location: 370651-371739 bp Feature: domain Description: CdaR Location: 370966-371704 bp Feature: domain Description: CdaR Location: 3 70966-3 71704 bp Feature: gene Location: 371977-372567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371980-372202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 71980-3 72202 bp Feature: domain Description: GIIM Note: maturase Location: 372283-372505 bp Feature: domain Description: GIIM Note: maturase Location: 3 72283 -3 72505 bp Feature: gene Location: 372921-373091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rSAM_mob_pairB (TIGR04470), RVT-GII, ParAB_family (cd02042), COG3943 (Uncharacterized conserved protein ), PRK11413 (putative hydratase; Provisional), CdaR (COG3835), GIIM (pfam08388)