myRT

myRT report for GCA_900066145.1_13414_6_20

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Seq: FMEX01000002.1 (501943 bp)
Overview 1 RT 1: 237167-242281 bp Neighborhood of RT #1 [237167, 242382] PRK10604 OmpR RVT-GII PinE Zn_ribbon_recom HTH_XRE Feature: gene Location: 237167-238345 bp Feature: domain Description: PRK10604 Location: 237452-238325 bp Feature: domain Description: PRK1 0604 Location: 237452-238325 bp Feature: gene Location: 238333-239007 bp Feature: domain Description: OmpR Location: 238345-239002 bp Feature: domain Description: OmpR Location: 238345-239002 bp Feature: gene Location: 239153-240550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239534-240197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239534-2401 97 bp Feature: gene Location: 240933-242135 bp Feature: domain Description: PinE Location: 240963-241599 bp Feature: domain Description: PinE Location: 240963-241 599 bp Feature: domain Description: Zn_ribbon_recom Location: 241863-242055 bp Feature: domain Description: Zn_ribbon_recom Location: 241 863-242055 bp Feature: gene Location: 242107-242382 bp Feature: domain Description: HTH_XRE Location: 242167-242281 bp Feature: domain Description: HTH_XRE Location: 2421 67-242281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMEX01000011.1 (120295 bp)
Overview 1 RT 1: 69622-86167 bp Neighborhood of RT #1 [69622, 87342] PRK07726 YtxK COG4646 PRK01172 KOG1000 RVT_N RVT-GII GIIM Peptidase_M78 YodL DUF3849 LPD18 LPD16 LPD16 Feature: gene Location: 69622-71715 bp Feature: domain Description: PRK07726 Location: 69637-71512 bp Feature: domain Description: PRK0772 6 Location: 69637-71512 bp Feature: gene Location: 71742-79262 bp Feature: domain Description: YtxK Location: 75747-76137 bp Feature: domain Description: YtxK Location: 75747-76137 bp Feature: domain Description: COG4646 Location: 76203-78765 bp Feature: domain Description: COG4646 Location: 762 03-78765 bp Feature: domain Description: PRK01172 Location: 78903-79107 bp Feature: domain Description: PRK01172 Location: 78903-79107 bp Feature: domain Description: KOG1000 Location: 79119-79245 bp Feature: domain Description: KOG1000 Location: 79119-792 45 bp Feature: gene Location: 79841-81511 bp Feature: domain Description: RVT_N Location: 79886-80129 bp Feature: domain Description: RVT_N Location: 79886-8012 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80174-80822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80174-8082 2 bp Feature: domain Description: GIIM Note: maturase Location: 80876-81107 bp Feature: domain Description: GIIM Note: maturase Location: 80876-81107 bp Feature: gene Location: 81512-82546 bp Feature: gene Location: 82591-87342 bp Feature: domain Description: Peptidase_M78 Location: 83146-83329 bp Feature: domain Description: Peptidase_M78 Location: 83146-8332 9 bp Feature: domain Description: YodL Location: 84091-84385 bp Feature: domain Description: YodL Location: 84091-84385 bp Feature: domain Description: DUF3849 Location: 84442-84817 bp Feature: domain Description: DUF3849 Location: 84442 -84817 bp Feature: domain Description: LPD18 Location: 84856-85099 bp Feature: domain Description: LPD18 Location: 84856-85099 bp Feature: domain Description: LPD16 Location: 85609-85822 bp Feature: domain Description: LPD16 Location: 85609-8582 2 bp Feature: domain Description: LPD16 Location: 85966-86167 bp Feature: domain Description: LPD16 Location: 85966-86167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMEX01000036.1 (5440 bp)
Overview 1 RT 1: 157-5105 bp Neighborhood of RT #1 [157, 5341] Y2_Tnp COG1373 RVT-GII YdiL Feature: gene Location: 157-834 bp Feature: domain Description: Y2_Tnp Location: 172-637 bp Feature: domain Description: Y2_Tnp Location: 172-63 7 bp Feature: gene Location: 1008-2276 bp Feature: domain Description: COG1373 Location: 1026-2256 bp Feature: domain Description: COG13 73 Location: 1026-2256 bp Feature: gene Location: 2653-3948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2908-3598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2908-3 598 bp Feature: gene Location: 4038-4283 bp Feature: gene Location: 4406-5341 bp Feature: domain Description: YdiL Location: 4484-5105 bp Feature: domain Description: YdiL Location: 4484-5105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMEX01000019.1 (66692 bp)
Overview 1 RT 1: 35761-39593 bp Neighborhood of RT #1 [35761, 39593] HTH_3 DUF2007 RVT-DGRs Feature: gene Location: 35761-36711 bp Feature: domain Description: HTH_3 Location: 35791-35953 bp Feature: domain Description: HTH_3 Location: 35791-35953 bp Feature: domain Description: DUF2007 Location: 36493-36691 bp Feature: domain Description: DUF2007 Location: 364 93-36691 bp Feature: gene Location: 36848-37150 bp Feature: gene Location: 37492-38691 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37687-38410 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37687-384 10 bp Feature: gene Location: 38684-39055 bp Feature: gene Location: 38997-39593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMEX01000005.1 (229452 bp)
Overview 1 RT 1: 144-5601 bp Neighborhood of RT #1 [144, 5606] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C Maff2 Feature: gene Location: 144-635 bp Feature: domain Description: DUF3801 Location: 207-603 bp Feature: domain Description: DUF3801 Location: 207-603 bp Feature: gene Location: 632-1537 bp Feature: domain Description: VirD4 Location: 893-1250 bp Feature: domain Description: VirD4 Location: 893-125 0 bp Feature: domain Description: VirD4 Location: 1346-1499 bp Feature: domain Description: VirD4 Location: 1346-1499 bp Feature: gene Location: 2196-4103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2526-3270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 26-3270 bp Feature: gene Location: 4250-5269 bp Feature: domain Description: TraG-D_C Location: 4715-5069 bp Feature: domain Description: TraG-D_C Location: 4715 -5 069 bp Feature: gene Location: 5391-5606 bp Feature: domain Description: Maff2 Location: 5394-5601 bp Feature: domain Description: Maff2 Location: 5 394-5 601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMEX01000003.1 (296997 bp)
Overview 1 RT 1: 271464-277755 bp Neighborhood of RT #1 [271464, 277826] SSB_OBF RVT-GII TnpV PRK13351 PRK13351 Feature: gene Location: 271464-271862 bp Feature: domain Description: SSB_OBF Location: 271476-271764 bp Feature: domain Description: SSB_OBF Location: 271476 -27176 4 bp Feature: gene Location: 271876-272337 bp Feature: gene Location: 273024-274937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273342-274068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273342-27406 8 bp Feature: gene Location: 275166-275540 bp Feature: domain Description: TnpV Location: 275202-275532 bp Feature: domain Description: TnpV Location: 275202-275532 bp Feature: gene Location: 275907-277826 bp Feature: domain Description: PRK13351 Location: 275910-276375 bp Feature: domain Description: PRK13351 Location: 275910-276 375 bp Feature: domain Description: PRK13351 Location: 276432-277755 bp Feature: domain Description: PRK13351 Location: 276 432-277755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMEX01000009.1 (152238 bp)
Overview 1 RT 1: 15429-20537 bp Neighborhood of RT #1 [15429, 20620] DDE_5 MATE_yoeA_like RVT-GII YhcG TnpV Feature: gene Location: 15429-16328 bp Feature: domain Description: DDE_5 Location: 15459-15936 bp Feature: domain Description: DDE_5 Location: 15459-15936 bp Feature: gene Location: 16893-18308 bp Feature: domain Description: MATE_yoeA_like Location: 16998-18279 bp Feature: domain Description: MATE_yoeA_like Location: 16998-1827 9 bp Feature: gene Location: 18424-19281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18742-19090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187 42-19090 bp Feature: gene Location: 19348-20331 bp Feature: domain Description: YhcG Location: 19822-20293 bp Feature: domain Description: YhcG Location: 19822-20293 bp Feature: gene Location: 20456-20620 bp Feature: domain Description: TnpV Location: 20486-20537 bp Feature: domain Description: TnpV Location: 20486-20537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT