myRT

myRT report for GCA_900066235.1_13414_6_40

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Seq: FMFN01000010.1 (41476 bp)
Overview 1 RT 1: 11624-18480 bp Neighborhood of RT #1 [11624, 18881] COG0610 RVT-AbiA HEPN_AbiA_CTD Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like HTH_XRE Feature: gene Location: 11624-12034 bp Feature: gene Location: 12027-14996 bp Feature: domain Description: COG0610 Location: 12162-14847 bp Feature: domain Description: COG061 0 Location: 1 21 62-1 4847 bp Feature: gene Location: 14993-16888 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 15362-15887 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1 5362-1 5887 bp Feature: domain Description: HEPN_AbiA_CTD Location: 16484-16874 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1 6484-1 6874 bp Feature: gene Location: 17146-18246 bp Feature: domain Description: Arm-DNA-bind_4 Location: 17179-17308 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1 71 79-1 7308 bp Feature: domain Description: Phage_int_SAM_3 Location: 17320-17485 bp Feature: domain Description: Phage_int_SAM_3 Location: 1 7320-1 7485 bp Feature: domain Description: INT_ICEBs1_C_like Location: 17668-18163 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 7668-1 81 63 bp Feature: gene Location: 18282-18881 bp Feature: domain Description: HTH_XRE Location: 18312-18480 bp Feature: domain Description: HTH_XRE Location: 1 831 2-1 8480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), HTH_XRE (smart00530)

Seq: FMFN01000004.1 (480814 bp)
Overview 1 RT 1: 167768-170782 bp Neighborhood of RT #1 [167768, 170853] HxlR RVT-GII SLC5sbd_PutP Feature: gene Location: 167768-168121 bp Feature: domain Description: HxlR Location: 167792-168101 bp Feature: domain Description: HxlR Location: 167792 -168101 bp Feature: gene Location: 168324-168479 bp Feature: gene Location: 168536-168766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168587-168761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168587-168761 bp Feature: gene Location: 168697-168996 bp Feature: gene Location: 169306-170853 bp Feature: domain Description: SLC5sbd_PutP Location: 169336-170782 bp Feature: domain Description: SLC5sbd_PutP Location: 169336-170782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), RVT-GII, SLC5sbd_PutP (cd11475)

Seq: FMFN01000023.1 (16672 bp)
Overview 1 RT 1: 11965-15424 bp Neighborhood of RT #1 [11965, 15424] DUF3852 RVT-GII Feature: gene Location: 11965-12300 bp Feature: domain Description: DUF3852 Location: 11971-12292 bp Feature: domain Description: DUF3 852 Location: 11971-12292 bp Feature: gene Location: 12360-12632 bp Feature: gene Location: 12958-14589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13024-13726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 024-13 726 bp Feature: gene Location: 14620-14841 bp Feature: gene Location: 15119-15424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3852 (pfam12963), RVT-GII