myRT

myRT report for GCA_900066425.1_13470_2_57

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Seq: FMED01000026.1 (1912 bp)
Overview 1 RT 1: 446-1661 bp Neighborhood of RT #1 [446, 1840] RVT-GII GIIM Feature: gene Location: 446-1840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1 388 bp Feature: domain Description: GIIM Note: maturase Location: 1445-1661 bp Feature: domain Description: GIIM Note: maturase Location: 1 445-1 661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FMED01000021.1 (17774 bp)
Overview 1 RT 1: 16871-17752 bp Neighborhood of RT #1 [16871, 17772] TnpV Tn916-Xis RVT-GII Feature: gene Location: 16871-17254 bp Feature: domain Description: TnpV Location: 16922-17246 bp Feature: domain Description: TnpV Location: 1692 2 -172 46 bp Feature: gene Location: 17269-17496 bp Feature: domain Description: Tn916-Xis Location: 17350-17488 bp Feature: domain Description: Tn916-Xis Location: 17350-17488 bp Feature: gene Location: 17590-17772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17704-17752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17704-17752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), Tn916-Xis (pfam09035), RVT-GII

Seq: FMED01000006.1 (220751 bp)
Overview 1 RT 1: 33918-38703 bp 2 RT 2: 187409-192595 bp Neighborhood of RT #1 [33918, 38969] PLDc_Bfil_DEXD_like SLATT_5 RVT-UG17 Laminin_II Laminin_II Neighborhood of RT #2 [187409, 192612] T4SS-DNA_transf RVT-GII RVT-GII TraG-D_C PRK13857 Feature: gene Location: 33918-35402 bp Feature: domain Description: PLDc_Bfil_DEXD_like Location: 34530-34881 bp Feature: domain Description: PLDc_Bfil_DEXD_like Location: 3 453 0-3 4881 bp Feature: gene Location: 35684-36244 bp Feature: domain Description: SLATT_5 Location: 35693-36230 bp Feature: domain Description: SLATT_5 Location: 3 5693 -3 623 0 bp Feature: gene Location: 36245-37555 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 36473-37058 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3 6473 -3 7058 bp Feature: gene Location: 37938-38159 bp Feature: gene Location: 38154-38969 bp Feature: domain Description: Laminin_II Location: 38259-38472 bp Feature: domain Description: Laminin_II Location: 3 8259-3 8472 bp Feature: domain Description: Laminin_II Location: 38565-38703 bp Feature: domain Description: Laminin_II Location: 3 8565-3 8703 bp Feature: gene Location: 187409-187612 bp Feature: gene Location: 187599-188873 bp Feature: domain Description: T4SS-DNA_transf Location: 187968-188817 bp Feature: domain Description: T4SS-DNA_transf Location: 187968-188817 bp Feature: gene Location: 189631-190356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189940-190327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189940-1903 27 bp Feature: gene Location: 190392-191540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190479-190695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190479-190695 bp Feature: gene Location: 191550-192230 bp Feature: domain Description: TraG-D_C Location: 191655-191964 bp Feature: domain Description: TraG-D_C Location: 191655-191964 bp Feature: gene Location: 192250-192612 bp Feature: domain Description: PRK13857 Location: 192391-192595 bp Feature: domain Description: PRK13 857 Location: 1923 91-192595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_Bfil_DEXD_like (cd09117), SLATT_5 (pfam18160), RVT-UG17, Laminin_II (pfam06009), T4SS-DNA_transf (pfam02534), RVT-GII, TraG-D_C (pfam12696), PRK13857 (pilin major subunit VirB2)

Seq: FMED01000002.1 (372384 bp)
Overview 1 RT 1: 75995-79854 bp Neighborhood of RT #1 [75995, 79856] Phage_XkdX RVT-DGRs YopX Feature: gene Location: 75995-76156 bp Feature: domain Description: Phage_XkdX Location: 76016-76124 bp Feature: domain Description: Phage_XkdX Location: 76016-76124 bp Feature: gene Location: 76171-76494 bp Feature: gene Location: 76439-77689 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76721-77351 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76721-77351 bp Feature: gene Location: 78058-79515 bp Feature: gene Location: 79560-79856 bp Feature: domain Description: YopX Location: 79740-79854 bp Feature: domain Description: YopX Location: 7974 0-79854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, YopX (pfam09643)