myRT

myRT report for GCA_900066455.1_13470_2_64

Download annotations/find similar RTs

Seq: FMFI01000019.1 (68671 bp)
Overview 1 RT 1: 30682-40079 bp Neighborhood of RT #1 [30682, 40105] PAP2_like_5 COG3292 Y_Y_Y TMAO_torS YesN RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like EPSP_synthase EPSP_synthase Feature: gene Location: 30682-32256 bp Feature: domain Description: PAP2_like_5 Location: 31048-31351 bp Feature: domain Description: PAP2_like_5 Location: 31 048-31 351 bp Feature: gene Location: 32270-34996 bp Feature: domain Description: COG3292 Location: 32381-32885 bp Feature: domain Description: COG3292 Location: 32381 -32885 bp Feature: domain Description: Y_Y_Y Location: 33155-33341 bp Feature: domain Description: Y_Y_Y Location: 331 55-33341 bp Feature: domain Description: TMAO_torS Location: 33491-34646 bp Feature: domain Description: TMAO_torS Location: 33491 -34646 bp Feature: domain Description: YesN Location: 34679-34982 bp Feature: domain Description: YesN Location: 34679-34982 bp Feature: gene Location: 34998-36806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35262-36084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35262-36084 bp Feature: domain Description: Intron_maturas2 Location: 36195-36465 bp Feature: domain Description: Intron_maturas2 Location: 361 95-36465 bp Feature: gene Location: 37353-38522 bp Feature: domain Description: Arm-DNA-bind_5 Location: 37383-37638 bp Feature: domain Description: Arm-DNA-bind_5 Location: 37383-37638 bp Feature: domain Description: Phage_int_SAM_5 Location: 37677-37998 bp Feature: domain Description: Phage_int_SAM_5 Location: 37677-37998 bp Feature: domain Description: INTN1_C_like Location: 38037-38505 bp Feature: domain Description: INTN1 _C_like Location: 38037-38505 bp Feature: gene Location: 38873-40105 bp Feature: domain Description: EPSP_synthase Location: 38912-39053 bp Feature: domain Description: EPSP_synthase Location: 3891 2-39053 bp Feature: domain Description: EPSP_synthase Location: 39059-40079 bp Feature: domain Description: EPSP_synthase Location: 39059-40079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_like_5 (cd03394), COG3292 (Periplasmic ligand-binding sensor domain ), Y_Y_Y (pfam07495), TMAO_torS (TIGR02956), YesN (COG4753), RVT-GII, Intron_maturas2 (pfam01348), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)
EPSP_synthase (pfam00275)

Seq: FMFI01000011.1 (101949 bp)
Overview 1 RT 1: 81530-87172 bp Neighborhood of RT #1 [81530, 87183] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 81530-82144 bp Feature: gene Location: 82172-82300 bp Feature: gene Location: 82395-84218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82659-83481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 659-83481 bp Feature: domain Description: Intron_maturas2 Location: 83655-83898 bp Feature: domain Description: Intron_maturas2 Location: 83655-83898 bp Feature: domain Description: HNHc Note: nucleases Location: 84009-84180 bp Feature: domain Description: HNHc Note: nucleases Location: 84009-84180 bp Feature: gene Location: 84476-84664 bp Feature: gene Location: 84787-87183 bp Feature: domain Description: Bac_Flav_CT_G Location: 84790-87172 bp Feature: domain Description: Bac_Flav_CT_G Location: 84790-87172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783)

Seq: FMFI01000112.1 (425 bp)
Overview 1 RT 1: 1-166 bp Neighborhood of RT #1 [1, 423] RVT-GII Feature: gene Location: 1-423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FMFI01000002.1 (191018 bp)
Overview 1 RT 1: 129159-133785 bp Neighborhood of RT #1 [129159, 133785] DUF1738 RVT-GII Intron_maturas2 MPTase-PolyVal Feature: gene Location: 129159-129662 bp Feature: domain Description: DUF1738 Location: 129213-129630 bp Feature: domain Description: DUF1738 Location: 129213-129630 bp Feature: gene Location: 129838-130095 bp Feature: gene Location: 130226-132037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130490-131312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304 90-131312 bp Feature: domain Description: Intron_maturas2 Location: 131453-131693 bp Feature: domain Description: Intron_maturas2 Location: 1314 53-131693 bp Feature: gene Location: 132039-133358 bp Feature: domain Description: MPTase-PolyVal Location: 132309-132618 bp Feature: domain Description: MPTase-PolyVal Location: 132309-132618 bp Feature: gene Location: 133411-133785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348), MPTase-PolyVal (pfam18818)

Seq: FMFI01000056.1 (20076 bp)
Overview 1 RT 1: 1566-6394 bp Neighborhood of RT #1 [1566, 6633] RVT-Retrons DNA_processg_A Feature: gene Location: 1566-1883 bp Feature: gene Location: 2200-3096 bp Feature: gene Location: 3098-4558 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3299-3929 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3299-3929 bp Feature: gene Location: 4857-5672 bp Feature: gene Location: 5713-6633 bp Feature: domain Description: DNA_processg_A Location: 5920-6394 bp Feature: domain Description: DNA_processg_A Location: 5 920-6394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DNA_processg_A (pfam02481)