myRT

myRT report for GCA_900066515.1_13470_2_87

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Seq: FMEH01000014.1 (67996 bp)
Overview 1 RT 1: 62271-64768 bp Neighborhood of RT #1 [62271, 64770] RVT-GII YgaK Feature: gene Location: 62271-62498 bp Feature: gene Location: 62583-62834 bp Feature: gene Location: 62968-63987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63268-63889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63268-63889 bp Feature: gene Location: 64328-64483 bp Feature: gene Location: 64612-64770 bp Feature: domain Description: YgaK Location: 64618-64768 bp Feature: domain Description: YgaK Location: 6461 8-64768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YgaK (COG1773)

Seq: FMEH01000016.1 (53102 bp)
Overview 1 RT 1: 18156-22140 bp Neighborhood of RT #1 [18156, 22142] DDE_Tnp_IS66 DDE_Tnp_IS66_C LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM RVT-GII TnpB_IS66 Feature: gene Location: 18156-18464 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18162-18360 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18162 -18360 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18381-18450 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18381-18450 bp Feature: gene Location: 18526-19701 bp Feature: domain Description: LZ_Tnp_IS66 Location: 18670-18883 bp Feature: domain Description: LZ_Tnp_IS66 Location: 18670-18883 bp Feature: domain Description: zf-IS66 Location: 18910-19042 bp Feature: domain Description: zf-IS66 Location: 18910-19042 bp Feature: domain Description: DDE_Tnp_IS66 Location: 19114-19687 bp Feature: domain Description: DDE_Tnp_IS66 Location: 19114-19687 bp Feature: gene Location: 19810-20439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19822-20077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1982 2 -2 0077 bp Feature: domain Description: GIIM Note: maturase Location: 20143-20362 bp Feature: domain Description: GIIM Note: maturase Location: 2 0143-2 0362 bp Feature: gene Location: 20443-21126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20704-21124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0704-2 112 4 bp Feature: gene Location: 21407-21643 bp Feature: gene Location: 21843-22142 bp Feature: domain Description: TnpB_IS66 Location: 21873-22140 bp Feature: domain Description: TnpB_IS66 Location: 2 1873-2 2 140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)

Seq: FMEH01000005.1 (161830 bp)
Overview 1 RT 1: 16140-19383 bp 2 RT 2: 91765-96587 bp Neighborhood of RT #1 [16140, 19421] Acetyltransf_1 RVT-GII PRK10562 ATC_hydrolase Neighborhood of RT #2 [91765, 96601] XRE HipB COG2932 RVT_N RVT-GII GIIM PRK03103 LexA_DNA_bind Feature: gene Location: 16140-16661 bp Feature: domain Description: Acetyltransf_1 Location: 16266-16581 bp Feature: domain Description: Acetyltransf_1 Location: 16266-16581 bp Feature: gene Location: 16824-17069 bp Feature: gene Location: 17159-18454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17414-18104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17414-18104 bp Feature: gene Location: 18587-19012 bp Feature: domain Description: PRK10562 Location: 18590-19007 bp Feature: domain Description: PRK10562 Location: 18590-19007 bp Feature: gene Location: 19107-19421 bp Feature: domain Description: ATC_hydrolase Location: 19170-19383 bp Feature: domain Description: ATC_hydrolase Location: 19170-193 83 bp Feature: gene Location: 91765-91965 bp Feature: domain Description: XRE Location: 91777-91960 bp Feature: domain Description: XRE Location: 91777-91960 bp Feature: gene Location: 92022-92753 bp Feature: domain Description: HipB Location: 92034-92250 bp Feature: domain Description: HipB Location: 9203 4-92250 bp Feature: domain Description: COG2932 Location: 92406-92718 bp Feature: domain Description: COG293 2 Location: 92406-92718 bp Feature: gene Location: 93574-95049 bp Feature: domain Description: RVT_N Location: 93625-93862 bp Feature: domain Description: RVT_N Location: 93 625-93 862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93913-94561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 913 -94561 bp Feature: domain Description: GIIM Note: maturase Location: 94612-94846 bp Feature: domain Description: GIIM Note: maturase Location: 94612-94846 bp Feature: gene Location: 95046-96374 bp Feature: domain Description: PRK03103 Location: 95172-96306 bp Feature: domain Description: PRK03 103 Location: 95172-963 06 bp Feature: gene Location: 96389-96601 bp Feature: domain Description: LexA_DNA_bind Location: 96398-96587 bp Feature: domain Description: LexA_DNA_bind Location: 963 98-96587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, PRK10562 (putative acetyltransferase; Provisional), ATC_hydrolase (pfam14196), XRE (COG1476), HipB (COG1396), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), RVT_N (pfam13655), GIIM (pfam08388), PRK03103 (DNA polymerase IV; Reviewed)
LexA_DNA_bind (pfam01726)

Seq: FMEH01000006.1 (146875 bp)
Overview 1 RT 1: 41090-45017 bp Neighborhood of RT #1 [41090, 45017] ZnMc_MMP_like RVT-GII GIIM quorum_AgrD Feature: gene Location: 41090-41611 bp Feature: domain Description: ZnMc_MMP_like Location: 41249-41555 bp Feature: domain Description: ZnMc_MMP_like Location: 4 124 9-4 1555 bp Feature: gene Location: 41627-42298 bp Feature: gene Location: 42809-44203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43127-43751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 3127-4 3751 bp Feature: domain Description: GIIM Note: maturase Location: 43808-44030 bp Feature: domain Description: GIIM Note: maturase Location: 4 3808-4 4 030 bp Feature: gene Location: 44433-44579 bp Feature: domain Description: quorum_AgrD Location: 44469-44574 bp Feature: domain Description: quorum_AgrD Location: 4 4 4 69-4 4 574 bp Feature: gene Location: 44598-45017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZnMc_MMP_like (cd04268), RVT-GII, GIIM (pfam08388), quorum_AgrD (TIGR04223)