myRT

myRT report for GCA_900066525.1_13470_2_88

Download annotations/find similar RTs

Seq: FMFM01000179.1 (1170 bp)
Overview 1 RT 1: 1-1170 bp Neighborhood of RT #1 [1, 1169] RVT-DGRs Feature: gene Location: 1-327 bp Feature: gene Location: 765-1169 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 771-1170 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 771 -1 1 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFM01000004.1 (202184 bp)
Overview 1 RT 1: 165306-170128 bp Neighborhood of RT #1 [165306, 170142] XRE HipB COG2932 RVT_N RVT-GII GIIM PRK03103 LexA_DNA_bind Feature: gene Location: 165306-165506 bp Feature: domain Description: XRE Location: 165318-165501 bp Feature: domain Description: XRE Location: 165318-165501 bp Feature: gene Location: 165563-166294 bp Feature: domain Description: HipB Location: 165575-165791 bp Feature: domain Description: HipB Location: 165575-165791 bp Feature: domain Description: COG2932 Location: 165947-166259 bp Feature: domain Description: COG2 932 Location: 165947-1662 59 bp Feature: gene Location: 167115-168590 bp Feature: domain Description: RVT_N Location: 167166-167403 bp Feature: domain Description: RVT_N Location: 167166-167403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167454-168102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167454-168102 bp Feature: domain Description: GIIM Note: maturase Location: 168153-168387 bp Feature: domain Description: GIIM Note: maturase Location: 168153-168387 bp Feature: gene Location: 168587-169915 bp Feature: domain Description: PRK03103 Location: 168713-169847 bp Feature: domain Description: PRK03103 Location: 168713-169847 bp Feature: gene Location: 169930-170142 bp Feature: domain Description: LexA_DNA_bind Location: 169939-170128 bp Feature: domain Description: LexA_DNA_bind Location: 169939-17012 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFM01000034.1 (37034 bp)
Overview 1 RT 1: 32205-36889 bp Neighborhood of RT #1 [32205, 36903] Cyt_C5_DNA_methylase TraC-F-type RVT_N RVT-GII GIIM AAA_10 Feature: gene Location: 32205-33191 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 32223-32712 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 3 2223 -3 2712 bp Feature: gene Location: 33188-34408 bp Feature: domain Description: TraC-F-type Location: 33491-34271 bp Feature: domain Description: TraC-F-type Location: 3 3 491-3 4271 bp Feature: gene Location: 34194-35873 bp Feature: domain Description: RVT_N Location: 34272-34512 bp Feature: domain Description: RVT_N Location: 3 4272-3 4512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34560-35220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 4560-3 5220 bp Feature: domain Description: GIIM Note: maturase Location: 35274-35508 bp Feature: domain Description: GIIM Note: maturase Location: 3 5274-3 5508 bp Feature: gene Location: 35965-36171 bp Feature: gene Location: 36409-36903 bp Feature: domain Description: AAA_10 Location: 36745-36889 bp Feature: domain Description: AAA_10 Location: 3 6745-3 6889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFM01000044.1 (14931 bp)
Overview 1 RT 1: 149-2884 bp Neighborhood of RT #1 [149, 2886] RVT-GII HNHc Maff2 Feature: gene Location: 149-2035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 82-1220 bp Feature: domain Description: HNHc Note: nucleases Location: 1766-1919 bp Feature: domain Description: HNHc Note: nucleases Location: 1766-1919 bp Feature: gene Location: 2078-2338 bp Feature: gene Location: 2755-2886 bp Feature: domain Description: Maff2 Location: 2758-2884 bp Feature: domain Description: Maff2 Location: 2758-2884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFM01000017.1 (90887 bp)
Overview 1 RT 1: 74440-82722 bp Neighborhood of RT #1 [74440, 82814] UgpB PDC2_MCP_like TMAO_torS TMAO_torS RVT-GII GIIM COG5340 DUF1016_N Feature: gene Location: 74440-76290 bp Feature: domain Description: UgpB Location: 74452-75679 bp Feature: domain Description: UgpB Location: 7445 2-75 679 bp Feature: gene Location: 76746-79340 bp Feature: domain Description: PDC2_MCP_like Location: 76968-77223 bp Feature: domain Description: PDC2_MCP_like Location: 76968-77223 bp Feature: domain Description: TMAO_torS Location: 77769-78933 bp Feature: domain Description: TMAO_torS Location: 77769-78933 bp Feature: domain Description: TMAO_torS Location: 78957-79335 bp Feature: domain Description: TMAO_torS Location: 7895 7-79335 bp Feature: gene Location: 79851-81245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80169-80793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80169-80793 bp Feature: domain Description: GIIM Note: maturase Location: 80850-81066 bp Feature: domain Description: GIIM Note: maturase Location: 8085 0-81066 bp Feature: gene Location: 81610-82215 bp Feature: domain Description: COG5340 Location: 81631-82105 bp Feature: domain Description: COG5 340 Location: 81631-82105 bp Feature: gene Location: 82320-82814 bp Feature: domain Description: DUF1016_N Location: 82368-82722 bp Feature: domain Description: DUF1016_N Location: 82368-82722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFM01000023.1 (64172 bp)
Overview 1 RT 1: 55768-62739 bp Neighborhood of RT #1 [55768, 62739] Spr TraC-F-type RVT-GII HNHc Feature: gene Location: 55768-57504 bp Feature: domain Description: Spr Location: 57115-57478 bp Feature: domain Description: Spr Location: 57115-57478 bp Feature: gene Location: 57508-58878 bp Feature: domain Description: TraC-F-type Location: 57541-58687 bp Feature: domain Description: TraC-F-type Location: 57541-586 87 bp Feature: gene Location: 59044-61017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59380-60118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59380-6 0118 bp Feature: domain Description: HNHc Note: nucleases Location: 60673-60811 bp Feature: domain Description: HNHc Note: nucleases Location: 6 06 73-6 0811 bp Feature: gene Location: 61370-61669 bp Feature: gene Location: 61741-62739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT