myRT

myRT report for GCA_900066535.1_13470_2_89

Download annotations/find similar RTs

Seq: FMFH01000059.1 (4226 bp)
Overview 1 RT 1: 775-4186 bp Neighborhood of RT #1 [775, 4224] DUF3851 RVT-GII Intron_maturas2 TraC-F-type Feature: gene Location: 775-1155 bp Feature: domain Description: DUF3851 Location: 781-1153 bp Feature: domain Description: DUF3851 Location: 781 -1 1 53 bp Feature: gene Location: 1155-1409 bp Feature: gene Location: 1548-3338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1815-2628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 5-2628 bp Feature: domain Description: Intron_maturas2 Location: 2712-3009 bp Feature: domain Description: Intron_maturas2 Location: 271 2-3009 bp Feature: gene Location: 3832-4224 bp Feature: domain Description: TraC-F-type Location: 3844-4186 bp Feature: domain Description: TraC-F-type Location: 3844-41 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFH01000033.1 (28968 bp)
Overview 1 RT 1: 15543-21569 bp Neighborhood of RT #1 [15543, 21577] TraG_VirD4 RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 TnpV Feature: gene Location: 15543-16292 bp Feature: domain Description: TraG_VirD4 Location: 15972-16122 bp Feature: domain Description: TraG_VirD4 Location: 15972 -1612 2 bp Feature: gene Location: 16442-16762 bp Feature: gene Location: 16920-18791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17232-17976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 32 -17976 bp Feature: gene Location: 18888-21236 bp Feature: domain Description: SR_TndX_transposase Location: 19374-19803 bp Feature: domain Description: SR_TndX_transposase Location: 19374-19803 bp Feature: domain Description: Recombinase Location: 19899-20259 bp Feature: domain Description: Recombinase Location: 19899-2 02 59 bp Feature: domain Description: Zn_ribbon_recom Location: 20304-20490 bp Feature: domain Description: Zn_ribbon_recom Location: 2 0304-2 0490 bp Feature: domain Description: DUF4368 Location: 20766-20961 bp Feature: domain Description: DUF4368 Location: 2 0766-2 0961 bp Feature: gene Location: 21233-21577 bp Feature: domain Description: TnpV Location: 21245-21569 bp Feature: domain Description: TnpV Location: 2 12 45-2 1569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFH01000012.1 (97210 bp)
Overview 1 RT 1: 91482-97208 bp Neighborhood of RT #1 [91482, 97208] COG2159 COG5263 COG5263 RVT-GII GIIM Feature: gene Location: 91482-92336 bp Feature: domain Description: COG2159 Location: 91722-92301 bp Feature: domain Description: COG2159 Location: 91722-923 01 bp Feature: gene Location: 92572-95181 bp Feature: domain Description: COG5263 Location: 93691-93886 bp Feature: domain Description: COG5263 Location: 93 691-93 886 bp Feature: domain Description: COG5263 Location: 94495-95089 bp Feature: domain Description: COG5263 Location: 94495-95089 bp Feature: gene Location: 95378-96772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95696-96320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95696-963 20 bp Feature: domain Description: GIIM Note: maturase Location: 96377-96599 bp Feature: domain Description: GIIM Note: maturase Location: 963 77-96599 bp Feature: gene Location: 96882-97208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFH01000004.1 (153888 bp)
Overview 1 RT 1: 112574-119593 bp Neighborhood of RT #1 [112574, 119691] Spr RVT-GII Intron_maturas2 VirB4_CagE VirB4_CagE PrgI Feature: gene Location: 112574-114241 bp Feature: domain Description: Spr Location: 113873-114221 bp Feature: domain Description: Spr Location: 113873-114 221 bp Feature: gene Location: 114521-114850 bp Feature: gene Location: 114917-116707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115184-115997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115184 -115997 bp Feature: domain Description: Intron_maturas2 Location: 116081-116378 bp Feature: domain Description: Intron_maturas2 Location: 116081-116378 bp Feature: gene Location: 117201-119387 bp Feature: domain Description: VirB4_CagE Location: 117339-117549 bp Feature: domain Description: VirB4 _CagE Location: 117339-11754 9 bp Feature: domain Description: VirB4_CagE Location: 118017-119349 bp Feature: domain Description: VirB4 _CagE Location: 118017-11934 9 bp Feature: gene Location: 119305-119691 bp Feature: domain Description: PrgI Location: 119320-119593 bp Feature: domain Description: PrgI Location: 119320-119593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFH01000035.1 (27197 bp)
Overview 1 RT 1: 22644-27104 bp Neighborhood of RT #1 [22644, 27142] VirB4_CagE VirB4_CagE AAA_10 RVT_N RVT-GII GIIM TraC-F-type Feature: gene Location: 22644-24158 bp Feature: domain Description: VirB4_CagE Location: 22767-23199 bp Feature: domain Description: VirB4_CagE Location: 22767-23199 bp Feature: domain Description: VirB4_CagE Location: 23433-23931 bp Feature: domain Description: VirB4_CagE Location: 23433-23931 bp Feature: domain Description: AAA_10 Location: 24000-24144 bp Feature: domain Description: AAA_10 Location: 24000-24144 bp Feature: gene Location: 24396-24602 bp Feature: gene Location: 24694-26373 bp Feature: domain Description: RVT_N Location: 24772-25012 bp Feature: domain Description: RVT_N Location: 24772-25 012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25060-25720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 060-25 720 bp Feature: domain Description: GIIM Note: maturase Location: 25774-26008 bp Feature: domain Description: GIIM Note: maturase Location: 25 774-26008 bp Feature: gene Location: 26159-27142 bp Feature: domain Description: TraC-F-type Location: 26462-27104 bp Feature: domain Description: TraC-F-type Location: 26462-27104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMFH01000001.1 (464825 bp)
Overview 1 RT 1: 246688-253348 bp Neighborhood of RT #1 [246688, 254886] TniQ RVT-GII HNHc TniQ Feature: gene Location: 246688-249093 bp Feature: domain Description: TniQ Location: 246709-247186 bp Feature: domain Description: TniQ Location: 246 709-247186 bp Feature: gene Location: 249226-249717 bp Feature: gene Location: 249930-251762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250233-250929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250233-250929 bp Feature: domain Description: HNHc Note: nucleases Location: 251529-251628 bp Feature: domain Description: HNHc Note: nucleases Location: 251529-2516 28 bp Feature: gene Location: 252505-252744 bp Feature: gene Location: 252847-254886 bp Feature: domain Description: TniQ Location: 252865-253348 bp Feature: domain Description: TniQ Location: 25286 5-253348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT