myRT

myRT report for GCA_900066605.1_14207_7_11

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Seq: FMFQ01000057.1 (25350 bp)
Overview 1 RT 1: 20850-25349 bp Neighborhood of RT #1 [20850, 25349] RfbB rmlA RVT-UG17 SLATT_5 Feature: gene Location: 20850-21869 bp Feature: domain Description: RfbB Location: 20853-21858 bp Feature: domain Description: RfbB Location: 20853-21 858 bp Feature: gene Location: 21923-22825 bp Feature: domain Description: rmlA Location: 21947-22799 bp Feature: domain Description: rmlA Location: 21 947-22799 bp Feature: gene Location: 22903-24234 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 23128-23713 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 231 28-2371 3 bp Feature: gene Location: 24252-24902 bp Feature: domain Description: SLATT_5 Location: 24285-24870 bp Feature: domain Description: SLATT_5 Location: 24285-24870 bp Feature: gene Location: 25212-25349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RfbB (COG1088), rmlA (TIGR01207), RVT-UG17, SLATT_5 (pfam18160)

Seq: FMFQ01000008.1 (179818 bp)
Overview 1 RT 1: 27785-32616 bp Neighborhood of RT #1 [27785, 32621] LexA_DNA_bind PRK03103 RVT_N RVT-GII GIIM HipB COG2932 XRE Feature: gene Location: 27785-27997 bp Feature: domain Description: LexA_DNA_bind Location: 27794-27983 bp Feature: domain Description: LexA_DNA_bind Location: 2 7794-2 7983 bp Feature: gene Location: 28012-29340 bp Feature: domain Description: PRK03103 Location: 28138-29272 bp Feature: domain Description: PRK03103 Location: 2 8138-2 92 72 bp Feature: gene Location: 29337-30806 bp Feature: domain Description: RVT_N Location: 29382-29619 bp Feature: domain Description: RVT_N Location: 2 9382 -2 9619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29670-30318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9670-30318 bp Feature: domain Description: GIIM Note: maturase Location: 30369-30603 bp Feature: domain Description: GIIM Note: maturase Location: 30369-30603 bp Feature: gene Location: 31633-32364 bp Feature: domain Description: HipB Location: 31645-31861 bp Feature: domain Description: HipB Location: 31645-31861 bp Feature: domain Description: COG2932 Location: 32017-32329 bp Feature: domain Description: COG2 932 Location: 32 017-32 32 9 bp Feature: gene Location: 32421-32621 bp Feature: domain Description: XRE Location: 32433-32616 bp Feature: domain Description: XRE Location: 32 433-32 616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LexA_DNA_bind (pfam01726), PRK03103 (DNA polymerase IV; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HipB (COG1396), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), XRE (COG1476)