myRT

myRT report for GCA_900066665.1_14207_7_23

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Seq: FMFT01000002.1 (564897 bp)
Overview 1 RT 1: 438307-441826 bp Neighborhood of RT #1 [438307, 442557] DUF1566 Avd_like RVT-DGRs TPR Feature: gene Location: 438307-439119 bp Feature: domain Description: DUF1566 Location: 438841-439093 bp Feature: domain Description: DUF1 566 Location: 438841 -439093 bp Feature: gene Location: 439265-439645 bp Feature: domain Description: Avd_like Location: 439292-439598 bp Feature: domain Description: Avd_like Location: 439292-439598 bp Feature: gene Location: 439660-441081 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 440032-440737 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 440032-440737 bp Feature: gene Location: 441047-441322 bp Feature: gene Location: 441418-442557 bp Feature: domain Description: TPR Location: 441487-441826 bp Feature: domain Description: TPR Location: 441 487-441 826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, TPR (smart00028)

Seq: FMFT01000035.1 (65740 bp)
Overview 1 RT 1: 33484-37280 bp Neighborhood of RT #1 [33484, 37280] RVT-DGRs RVT-DGRs Feature: gene Location: 33484-34803 bp Feature: gene Location: 34833-35036 bp Feature: gene Location: 35320-36045 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35653-35977 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35653-35977 bp Feature: gene Location: 36017-36331 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36029-36257 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3602 9-362 57 bp Feature: gene Location: 36279-36863 bp Feature: gene Location: 36885-37280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: FMFT01000021.1 (129538 bp)
Overview 1 RT 1: 68189-71004 bp Neighborhood of RT #1 [68189, 71004] RVT-DGRs Feature: gene Location: 68189-68422 bp Feature: gene Location: 68436-68693 bp Feature: gene Location: 68797-70098 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69007-69607 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69007-69607 bp Feature: gene Location: 70095-70580 bp Feature: gene Location: 70762-71004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: FMFT01000028.1 (88987 bp)
Overview 1 RT 1: 35528-45569 bp Neighborhood of RT #1 [35528, 45625] Laminin_G_3 pfam08757 LRR_AMN1 RVT-DGRs XerC Feature: gene Location: 35528-42316 bp Feature: domain Description: Laminin_G_3 Location: 37964-38345 bp Feature: domain Description: Laminin_G_3 Location: 37964 -3834 5 bp Feature: domain Description: pfam08757 Location: 39140-39491 bp Feature: domain Description: pfam08757 Location: 3914 0-394 91 bp Feature: domain Description: LRR_AMN1 Location: 40073-40520 bp Feature: domain Description: LRR_AMN1 Location: 4 0073-4 0520 bp Feature: gene Location: 42478-42696 bp Feature: gene Location: 42750-44045 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42966-43557 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 2966-4 3557 bp Feature: gene Location: 44047-44541 bp Feature: gene Location: 44582-45625 bp Feature: domain Description: XerC Location: 44762-45569 bp Feature: domain Description: XerC Location: 4 4 762-4 5569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034), RVT-DGRs, XerC (COG4973)

Seq: FMFT01000067.1 (2228 bp)
Overview 1 RT 1: 3-2226 bp Neighborhood of RT #1 [3, 2226] RVT-DGRs Feature: gene Location: 3-332 bp Feature: gene Location: 342-1685 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 549-1140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 49-1140 bp Feature: gene Location: 1975-2226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: FMFT01000061.1 (9481 bp)
Overview 1 RT 1: 3411-9219 bp Neighborhood of RT #1 [3411, 9479] TMAO_torS TMAO_torS NlpE RVT-GII GIIM Rhs_assc_core ZnMc Feature: gene Location: 3411-5711 bp Feature: domain Description: TMAO_torS Location: 3777-4275 bp Feature: domain Description: TMAO_torS Location: 3777-4275 bp Feature: domain Description: TMAO_torS Location: 4314-5400 bp Feature: domain Description: TMAO_torS Location: 4314-5400 bp Feature: gene Location: 5929-6189 bp Feature: domain Description: NlpE Location: 5965-6145 bp Feature: domain Description: NlpE Location: 596 5-6 145 bp Feature: gene Location: 6290-7693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6632-7250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 6 32-7250 bp Feature: domain Description: GIIM Note: maturase Location: 7304-7529 bp Feature: domain Description: GIIM Note: maturase Location: 7304-7529 bp Feature: gene Location: 8222-8629 bp Feature: gene Location: 8574-9479 bp Feature: domain Description: Rhs_assc_core Location: 8577-8802 bp Feature: domain Description: Rhs_assc_core Location: 8577-8802 bp Feature: domain Description: ZnMc Location: 8874-9219 bp Feature: domain Description: ZnMc Location: 8874-9219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TMAO_torS (TIGR02956), NlpE (pfam04170), RVT-GII, GIIM (pfam08388), Rhs_assc_core (TIGR03696), ZnMc (smart00235)

Seq: FMFT01000004.1 (377237 bp)
Overview 1 RT 1: 337007-340521 bp Neighborhood of RT #1 [337007, 340521] RVT-DGRs Feature: gene Location: 337007-337156 bp Feature: gene Location: 337668-337946 bp Feature: gene Location: 338055-339695 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 338262-339003 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 338262-339003 bp Feature: gene Location: 339692-340072 bp Feature: gene Location: 340267-340521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: FMFT01000024.1 (112085 bp)
Overview 1 RT 1: 24167-32799 bp Neighborhood of RT #1 [24167, 32799] Alginate_lyase Hepar_II_III LacZ RVT-GII GIIM DUF4890 Feature: gene Location: 24167-26077 bp Feature: domain Description: Alginate_lyase Location: 24560-25079 bp Feature: domain Description: Alginate_lyase Location: 24560-25079 bp Feature: domain Description: Hepar_II_III Location: 25331-25712 bp Feature: domain Description: Hepar_II_III Location: 25331-25712 bp Feature: gene Location: 26087-28873 bp Feature: domain Description: LacZ Location: 26165-27431 bp Feature: domain Description: LacZ Location: 26165-27431 bp Feature: gene Location: 28980-30392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29316-29931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29316-29931 bp Feature: domain Description: GIIM Note: maturase Location: 29985-30216 bp Feature: domain Description: GIIM Note: maturase Location: 2998 5-30216 bp Feature: gene Location: 30886-31422 bp Feature: domain Description: DUF4890 Location: 30988-31354 bp Feature: domain Description: DUF48 90 Location: 3098 8 -31354 bp Feature: gene Location: 31897-32799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Alginate_lyase (pfam05426), Hepar_II_III (pfam07940), LacZ (COG3250), RVT-GII, GIIM (pfam08388), DUF4890 (pfam16231)

Seq: FMFT01000019.1 (131424 bp)
Overview 1 RT 1: 11230-13704 bp Neighborhood of RT #1 [11230, 13704] RVT_N RVT-GII GIIM Feature: gene Location: 11230-11376 bp Feature: gene Location: 11383-11613 bp Feature: gene Location: 11699-13201 bp Feature: domain Description: RVT_N Location: 11765-12008 bp Feature: domain Description: RVT_N Location: 11765-12008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12053-12695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12053-1269 5 bp Feature: domain Description: GIIM Note: maturase Location: 12752-12983 bp Feature: domain Description: GIIM Note: maturase Location: 12752-129 83 bp Feature: gene Location: 13026-13388 bp Feature: gene Location: 13537-13704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: FMFT01000007.1 (309405 bp)
Overview 1 RT 1: 296133-300351 bp Neighborhood of RT #1 [296133, 300362] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 296133-297029 bp Feature: gene Location: 297114-297626 bp Feature: gene Location: 297781-298986 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 297970-298666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 297970-298666 bp Feature: gene Location: 299186-299575 bp Feature: domain Description: Avd_like Location: 299210-299516 bp Feature: domain Description: Avd_like Location: 299210 -299516 bp Feature: gene Location: 299652-300362 bp Feature: domain Description: DUF1566 Location: 300081-300351 bp Feature: domain Description: DUF1566 Location: 300081-300351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: FMFT01000008.1 (242403 bp)
Overview 1 RT 1: 112779-115987 bp Neighborhood of RT #1 [112779, 115987] RVT-UG27 Feature: gene Location: 112779-113057 bp Feature: gene Location: 113087-113353 bp Feature: gene Location: 113403-114665 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 113595-114231 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 11 3595-11 4231 bp Feature: gene Location: 114658-115326 bp Feature: gene Location: 115340-115987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: FMFT01000006.1 (319783 bp)
Overview 1 RT 1: 308251-319782 bp Neighborhood of RT #1 [308251, 319782] COG4646 RVT-GII Intron_maturas2 COG4646 RVT_N RVT-GII YkfC Feature: gene Location: 308251-311529 bp Feature: domain Description: COG4646 Location: 310639-311518 bp Feature: domain Description: COG4646 Location: 310639-311518 bp Feature: gene Location: 311620-311898 bp Feature: gene Location: 312089-313891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312353-313175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312 353-313175 bp Feature: domain Description: Intron_maturas2 Location: 313337-313556 bp Feature: domain Description: Intron_maturas2 Location: 313337-313556 bp Feature: gene Location: 313878-315512 bp Feature: domain Description: COG4646 Location: 313983-315132 bp Feature: domain Description: COG4646 Location: 313983-315132 bp Feature: gene Location: 316118-317854 bp Feature: domain Description: RVT_N Location: 316241-316484 bp Feature: domain Description: RVT_N Location: 316241-316484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316529-317177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316529-317177 bp Feature: domain Description: YkfC Location: 317387-317477 bp Feature: domain Description: YkfC Location: 317387-317477 bp Feature: gene Location: 317808-319010 bp Feature: gene Location: 319621-319782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), RVT_N (pfam13655), YkfC (COG3344)

Seq: FMFT01000058.1 (10152 bp)
Overview 1 RT 1: 652-4122 bp Neighborhood of RT #1 [652, 4122] RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 652-2304 bp Feature: domain Description: RVT_N Location: 706-949 bp Feature: domain Description: RVT_N Location: 706-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-1642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-1642 bp Feature: domain Description: GIIM Note: maturase Location: 1696-1927 bp Feature: domain Description: GIIM Note: maturase Location: 1696-1927 bp Feature: gene Location: 2309-3514 bp Feature: domain Description: TraG-D_C Location: 2891-3221 bp Feature: domain Description: TraG-D_C Location: 2891-3221 bp Feature: gene Location: 3556-4122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)