myRT

myRT report for GCA_900066825.1_14207_7_54

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Seq: FMGH01000003.1 (217904 bp)
Overview 1 RT 1: 6793-10562 bp Neighborhood of RT #1 [6793, 11605] ChiA1_BD ChiA1_BD RVT-DGRs CarboxypepD_reg CarboxypepD_reg Feature: gene Location: 6793-6975 bp Feature: gene Location: 6972-7616 bp Feature: domain Description: ChiA1_BD Location: 7320-7449 bp Feature: domain Description: ChiA1 _BD Location: 7320-7449 bp Feature: domain Description: ChiA1_BD Location: 7506-7584 bp Feature: domain Description: ChiA1 _BD Location: 7506-7584 bp Feature: gene Location: 7577-8680 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7802-8393 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7802-8393 bp Feature: gene Location: 8746-9033 bp Feature: gene Location: 9143-11605 bp Feature: domain Description: CarboxypepD_reg Location: 10163-10337 bp Feature: domain Description: CarboxypepD_reg Location: 1 01 63-1 0337 bp Feature: domain Description: CarboxypepD_reg Location: 10382-10562 bp Feature: domain Description: CarboxypepD_reg Location: 1 0382-1 0562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMGH01000014.1 (64766 bp)
Overview 1 RT 1: 15252-19554 bp Neighborhood of RT #1 [15252, 19583] ChiA1_BD ChiA1_BD RVT-DGRs Avd_like Feature: gene Location: 15252-16061 bp Feature: domain Description: ChiA1_BD Location: 15528-15618 bp Feature: domain Description: ChiA1_BD Location: 1552 8-15618 bp Feature: domain Description: ChiA1_BD Location: 15927-16032 bp Feature: domain Description: ChiA1_BD Location: 1592 7-16032 bp Feature: gene Location: 16080-17786 bp Feature: gene Location: 17755-18840 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17965-18571 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17965-18571 bp Feature: gene Location: 18996-19130 bp Feature: gene Location: 19182-19583 bp Feature: domain Description: Avd_like Location: 19227-19554 bp Feature: domain Description: Avd_like Location: 192 2 7-19554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMGH01000001.1 (1366117 bp)
Overview 1 RT 1: 239595-245796 bp 2 RT 2: 751860-755778 bp 3 RT 3: 915859-922071 bp 4 RT 4: 1245338-1249411 bp Neighborhood of RT #1 [239595, 245796] pilus_cpaB Peptidase_A24 RVT-GII Intron_maturas2 Neighborhood of RT #2 [751860, 755810] Avd_like RVT-DGRs ChiA1_BD ChiA1_BD Neighborhood of RT #3 [915859, 922121] TnpV T4SS-DNA_transf SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT-GII Intron_maturas2 HNHc DUF3801 Neighborhood of RT #4 [1245338, 1249411] Avd_like RVT-DGRs Feature: gene Location: 239595-240434 bp Feature: domain Description: pilus_cpaB Location: 239631-240393 bp Feature: domain Description: pilus_cpaB Location: 23 963 1-2403 93 bp Feature: gene Location: 240447-240896 bp Feature: domain Description: Peptidase_A24 Location: 240462-240783 bp Feature: domain Description: Peptidase_A24 Location: 240462-240783 bp Feature: gene Location: 241062-242858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241305-242136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2413 05-24213 6 bp Feature: domain Description: Intron_maturas2 Location: 242208-242514 bp Feature: domain Description: Intron_maturas2 Location: 242208-242514 bp Feature: gene Location: 243419-245149 bp Feature: gene Location: 245227-245796 bp Feature: gene Location: 751860-752252 bp Feature: domain Description: Avd_like Location: 751869-752196 bp Feature: domain Description: Avd_like Location: 751869-752196 bp Feature: gene Location: 752266-752397 bp Feature: gene Location: 752548-753774 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 752764-753370 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 752764-753 3 70 bp Feature: gene Location: 753614-755320 bp Feature: gene Location: 755340-755810 bp Feature: domain Description: ChiA1_BD Location: 755514-755646 bp Feature: domain Description: ChiA1_BD Location: 755514-755646 bp Feature: domain Description: ChiA1_BD Location: 755700-755778 bp Feature: domain Description: ChiA1_BD Location: 755700-755778 bp Feature: gene Location: 915859-916203 bp Feature: domain Description: TnpV Location: 915871-916195 bp Feature: domain Description: TnpV Location: 915871-916195 bp Feature: gene Location: 916200-918662 bp Feature: domain Description: T4SS-DNA_transf Location: 916218-916641 bp Feature: domain Description: T4SS-DNA_transf Location: 916218-916641 bp Feature: domain Description: SR_TndX_transposase Location: 916800-917229 bp Feature: domain Description: SR_TndX_transposase Location: 916800-917229 bp Feature: domain Description: Recombinase Location: 917325-917685 bp Feature: domain Description: Recombinase Location: 9173 25-917685 bp Feature: domain Description: Zn_ribbon_recom Location: 917730-917916 bp Feature: domain Description: Zn_ribbon_recom Location: 91773 0-917916 bp Feature: domain Description: DUF4368 Location: 918192-918387 bp Feature: domain Description: DUF43 68 Location: 918192-9183 87 bp Feature: gene Location: 918753-920570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919017-919836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919017-91983 6 bp Feature: domain Description: Intron_maturas2 Location: 919908-920211 bp Feature: domain Description: Intron_maturas2 Location: 919908-920211 bp Feature: domain Description: HNHc Note: nucleases Location: 920391-920535 bp Feature: domain Description: HNHc Note: nucleases Location: 9203 91-92053 5 bp Feature: gene Location: 921130-921633 bp Feature: gene Location: 921630-922121 bp Feature: domain Description: DUF3801 Location: 921711-922071 bp Feature: domain Description: DUF3 801 Location: 921711-922071 bp Feature: gene Location: 1245338-1245544 bp Feature: gene Location: 1245573-1245866 bp Feature: domain Description: Avd_like Location: 1245576-1245849 bp Feature: domain Description: Avd_like Location: 1245576-1245849 bp Feature: gene Location: 1246220-1247446 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1246493-1247135 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1246493 -124713 5 bp Feature: gene Location: 1247358-1249214 bp Feature: gene Location: 1249223-1249411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMGH01000015.1 (62432 bp)
Overview 1 RT 1: 25123-28381 bp Neighborhood of RT #1 [25123, 28381] COG4877 RVT-DGRs ChiA1_BD ChtBD3 Feature: gene Location: 25123-25311 bp Feature: domain Description: COG4877 Location: 25129-25258 bp Feature: domain Description: COG4 877 Location: 25129-25258 bp Feature: gene Location: 25315-25779 bp Feature: gene Location: 26240-27412 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26519-27134 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26519-27134 bp Feature: gene Location: 27373-27990 bp Feature: domain Description: ChiA1_BD Location: 27688-27817 bp Feature: domain Description: ChiA1_BD Location: 27688-27817 bp Feature: domain Description: ChtBD3 Location: 27877-27958 bp Feature: domain Description: ChtBD3 Location: 27877-27958 bp Feature: gene Location: 27980-28381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMGH01000011.1 (70752 bp)
Overview 1 RT 1: 4872-10167 bp Neighborhood of RT #1 [4872, 10592] RVT-DGRs Avd_like DUF3751 Feature: gene Location: 4872-5300 bp Feature: gene Location: 5856-7574 bp Feature: gene Location: 7559-8680 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7763-8429 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7763-8429 bp Feature: gene Location: 9066-9479 bp Feature: domain Description: Avd_like Location: 9093-9426 bp Feature: domain Description: Avd_like Location: 9093-9426 bp Feature: gene Location: 9705-10592 bp Feature: domain Description: DUF3751 Location: 9720-10167 bp Feature: domain Description: DUF375 1 Location: 9720-10167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMGH01000012.1 (68903 bp)
Overview 1 RT 1: 23187-30436 bp Neighborhood of RT #1 [23187, 30513] RVT-GII HNHc TraC-F-type CHAP Feature: gene Location: 23187-24182 bp Feature: gene Location: 24254-24553 bp Feature: gene Location: 24906-26879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25242-25980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25242-25980 bp Feature: domain Description: HNHc Note: nucleases Location: 26535-26673 bp Feature: domain Description: HNHc Note: nucleases Location: 26 535-26 6 73 bp Feature: gene Location: 27012-28427 bp Feature: domain Description: TraC-F-type Location: 27039-28290 bp Feature: domain Description: TraC-F-type Location: 27039-28290 bp Feature: gene Location: 28438-30513 bp Feature: domain Description: CHAP Location: 30184-30436 bp Feature: domain Description: CHAP Location: 30184-30436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FMGH01000002.1 (246862 bp)
Overview 1 RT 1: 108694-113637 bp Neighborhood of RT #1 [108694, 113637] Big_3 Big_3 RVT-DGRs Feature: gene Location: 108694-111399 bp Feature: domain Description: Big_3 Location: 108757-108958 bp Feature: domain Description: Big_3 Location: 1087 57 -108958 bp Feature: domain Description: Big_3 Location: 108994-109198 bp Feature: domain Description: Big_3 Location: 108994-109198 bp Feature: gene Location: 111516-111836 bp Feature: gene Location: 111919-113094 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 112171-112723 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11217 1-1127 23 bp Feature: gene Location: 113109-113474 bp Feature: gene Location: 113494-113637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT