myRT

myRT report for GCA_900066965.1_14207_7_81

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Seq: FMGU01000011.1 (129877 bp)
Overview 1 RT 1: 126986-129770 bp Neighborhood of RT #1 [126986, 129838] NagC RVT-GII Feature: gene Location: 126986-127291 bp Feature: gene Location: 127435-128436 bp Feature: domain Description: NagC Location: 127552-128410 bp Feature: domain Description: NagC Location: 1 27552-1 2841 0 bp Feature: gene Location: 129071-129838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129389-129770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29389-1 29770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NagC (COG1940), RVT-GII

Seq: FMGU01000025.1 (64610 bp)
Overview 1 RT 1: 125-7299 bp Neighborhood of RT #1 [125, 7299] RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII COG3547 Feature: gene Location: 125-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131-377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131-377 bp Feature: domain Description: GIIM Note: maturase Location: 428-662 bp Feature: domain Description: GIIM Note: maturase Location: 42 8-662 bp Feature: gene Location: 992-2005 bp Feature: domain Description: Phage_int_SAM_1 Location: 1046-1292 bp Feature: domain Description: Phage_int_SAM_1 Location: 1046-12 92 bp Feature: domain Description: INT_RitC_C_like Location: 1373-1919 bp Feature: domain Description: INT_RitC_C_like Location: 1373-1919 bp Feature: gene Location: 1986-2969 bp Feature: domain Description: INT_RitB_C_like Location: 2322-2907 bp Feature: domain Description: INT_RitB_C_like Location: 2 32 2 -2 907 bp Feature: gene Location: 2962-4197 bp Feature: domain Description: Phage_int_SAM_1 Location: 3316-3538 bp Feature: domain Description: Phage_int_SAM_1 Location: 3316-3538 bp Feature: domain Description: INT_RitA_C_like Location: 3631-4171 bp Feature: domain Description: INT_RitA_C_like Location: 3631-4171 bp Feature: gene Location: 4319-5110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4673-5057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4673-5057 bp Feature: gene Location: 5730-7022 bp Feature: domain Description: COG3547 Location: 5787-6822 bp Feature: domain Description: COG3547 Location: 5787-682 2 bp Feature: gene Location: 7123-7299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188), COG3547 (Transposase )

Seq: FMGU01000042.1 (19454 bp)
Overview 1 RT 1: 3-2854 bp Neighborhood of RT #1 [3, 2854] RVT_N RVT-GII COG5015 Feature: gene Location: 3-695 bp Feature: domain Description: RVT_N Location: 48-285 bp Feature: domain Description: RVT_N Location: 48-285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 6-696 bp Feature: gene Location: 2218-2553 bp Feature: domain Description: COG5015 Location: 2221-2512 bp Feature: domain Description: COG5015 Location: 2221-2512 bp Feature: gene Location: 2624-2854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, COG5015 (Uncharacterized protein, pyridoxamine 5'-phosphate oxidase (PNPOx-like) family )

Seq: FMGU01000057.1 (903 bp)
Overview 1 RT 1: 158-719 bp Neighborhood of RT #1 [158, 787] RVT-GII GIIM Feature: gene Location: 158-787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164-434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164 -4 34 bp Feature: domain Description: GIIM Note: maturase Location: 500-719 bp Feature: domain Description: GIIM Note: maturase Location: 500-719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FMGU01000010.1 (144787 bp)
Overview 1 RT 1: 146-2398 bp Neighborhood of RT #1 [146, 2499] RVT-GII GIIM Zn_ADH7 Glyoxalase Feature: gene Location: 146-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-380 bp Feature: domain Description: GIIM Note: maturase Location: 437-653 bp Feature: domain Description: GIIM Note: maturase Location: 437-65 3 bp Feature: gene Location: 1048-2097 bp Feature: domain Description: Zn_ADH7 Location: 1072-2083 bp Feature: domain Description: Zn_ADH7 Location: 1072-2083 bp Feature: gene Location: 2107-2499 bp Feature: domain Description: Glyoxalase Location: 2134-2398 bp Feature: domain Description: Glyoxalase Location: 2134-2398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Zn_ADH7 (cd08261), Glyoxalase (pfam00903)