myRT

myRT report for GCA_900066985.1_14207_7_90

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Seq: FMGY01000001.1 uncultured Lachnospira sp. isolate 2789STDY5834967 genome assembly, contig: SCcontig000001, whole genome shotgun sequence (362516 bp)
Overview 1 RT 1: 162636-168110 bp Neighborhood of RT #1 [162636, 168127] FRG FRG RVT-AbiA HEPN_AbiA_CTD MutT_pyrophosphohydrolase Adenine_glyco Feature: gene Location: 162636-163493 bp Feature: domain Description: FRG Location: 162786-162855 bp Feature: domain Description: FRG Location: 1 62786-1 62855 bp Feature: domain Description: FRG Location: 162882-163005 bp Feature: domain Description: FRG Location: 1 62882-1 63005 bp Feature: gene Location: 163575-164831 bp Feature: gene Location: 164961-166877 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 165309-165834 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1 65309-1 65834 bp Feature: domain Description: HEPN_AbiA_CTD Location: 166440-166815 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1 66440-1 6681 5 bp Feature: gene Location: 167081-167482 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 167108-167468 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 1 671 08-1 67468 bp Feature: gene Location: 167552-168127 bp Feature: domain Description: Adenine_glyco Location: 167585-168110 bp Feature: domain Description: Adenine_glyco Location: 1 67585-1 681 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRG (smart00901), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), MutT_pyrophosphohydrolase (cd03425), Adenine_glyco (pfam03352)

Seq: FMGY01000011.1 uncultured Lachnospira sp. isolate 2789STDY5834967 genome assembly, contig: SCcontig000011, whole genome shotgun sequence (119481 bp)
Overview 1 RT 1: 94725-97385 bp Neighborhood of RT #1 [94725, 97385] Avd_like RVT-DGRs SH3_and_anchor Feature: gene Location: 94725-95156 bp Feature: domain Description: Avd_like Location: 94788-95094 bp Feature: domain Description: Avd_like Location: 94788-95094 bp Feature: gene Location: 95302-95514 bp Feature: gene Location: 95521-96624 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 95728-96376 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9572 8-96376 bp Feature: gene Location: 96775-97089 bp Feature: domain Description: SH3_and_anchor Location: 96802-97078 bp Feature: domain Description: SH3_and_anchor Location: 96802 -97078 bp Feature: gene Location: 97095-97385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, SH3_and_anchor (TIGR04211)

Seq: FMGY01000027.1 uncultured Lachnospira sp. isolate 2789STDY5834967 genome assembly, contig: SCcontig000027, whole genome shotgun sequence (47820 bp)
Overview 1 RT 1: 14746-21241 bp Neighborhood of RT #1 [14746, 21303] RAMP_I_III Cas10_III RVT-CRISPR COG4951 Cas2_I_II_III Cas1_I-II-III Feature: gene Location: 14746-15315 bp Feature: domain Description: RAMP_I_III Location: 14770-15286 bp Feature: domain Description: RAMP_I_III Location: 14770-15286 bp Feature: gene Location: 15312-16925 bp Feature: domain Description: Cas10_III Location: 15744-16356 bp Feature: domain Description: Cas10_III Location: 15744-163 56 bp Feature: gene Location: 17113-19998 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 17317-17923 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 173 17-17923 bp Feature: domain Description: COG4951 Location: 18670-19384 bp Feature: domain Description: COG4951 Location: 18670-193 84 bp Feature: gene Location: 20018-20281 bp Feature: domain Description: Cas2_I_II_III Location: 20027-20237 bp Feature: domain Description: Cas2_I_II_III Location: 20027-2023 7 bp Feature: gene Location: 20293-21303 bp Feature: domain Description: Cas1_I-II-III Location: 20305-21241 bp Feature: domain Description: Cas1_I-II-III Location: 203 05-21241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAMP_I_III (cl21471), Cas10_III (cl21742), RVT-CRISPR, COG4951 (Uncharacterized protein ), Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656)

Seq: FMGY01000042.1 uncultured Lachnospira sp. isolate 2789STDY5834967 genome assembly, contig: SCcontig000042, whole genome shotgun sequence (22599 bp)
Overview 1 RT 1: 18117-22597 bp Neighborhood of RT #1 [18117, 22597] ArsR InsE InsE PHA02517 RVT-UG14 Feature: gene Location: 18117-18476 bp Feature: domain Description: ArsR Location: 18204-18462 bp Feature: domain Description: ArsR Location: 18204 -184 62 bp Feature: gene Location: 18785-20176 bp Feature: domain Description: InsE Location: 18791-18917 bp Feature: domain Description: InsE Location: 18791-18917 bp Feature: domain Description: InsE Location: 18968-19241 bp Feature: domain Description: InsE Location: 18968-1924 1 bp Feature: domain Description: PHA02517 Location: 19385-20153 bp Feature: domain Description: PHA02517 Location: 19385-20153 bp Feature: gene Location: 20376-21959 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 20724-21081 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 20724 -21081 bp Feature: gene Location: 22466-22597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArsR (pfam09824), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-UG14