myRT

myRT report for GCA_900067135.1_IMG-taxon_2602042090_annotated_assembly

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Seq: FJUR01000004.1 (19892 bp)
Overview 1 RT 1: 3756-7644 bp Neighborhood of RT #1 [3756, 7676] PHA02517 RVT-GII GIIM RVT-GII PHA02517 Feature: gene Location: 3756-4484 bp Feature: gene Location: 4521-4979 bp Feature: domain Description: PHA02517 Location: 4524-4977 bp Feature: domain Description: PHA0251 7 Location: 4524-4977 bp Feature: gene Location: 5312-5743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5318-5456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 531 8-5456 bp Feature: domain Description: GIIM Note: maturase Location: 5528-5732 bp Feature: domain Description: GIIM Note: maturase Location: 5528-5732 bp Feature: gene Location: 5754-6608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6027-6504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6027-6504 bp Feature: gene Location: 6777-6983 bp Feature: gene Location: 7224-7676 bp Feature: domain Description: PHA02517 Location: 7290-7644 bp Feature: domain Description: PHA0251 7 Location: 7290-7644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FJUR01000002.1 (1172580 bp)
Overview 1 RT 1: 527778-532343 bp 2 RT 2: 571123-576179 bp 3 RT 3: 917859-924998 bp 4 RT 4: 1131902-1137024 bp 5 RT 5: 1154110-1158335 bp Neighborhood of RT #1 [527778, 533077] InsE PHA02517 RVT-GII GIIM PRK08181 rve Neighborhood of RT #2 [571123, 576823] HTH_1 PBP2_CrgA_like_3 Tra5 RVT-GII GIIM PRK09183 COG4584 Neighborhood of RT #3 [917859, 925033] Transposase_mut Transposase_mut RVT-GII 2A0602 Neighborhood of RT #4 [1131902, 1137059] AdhE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #5 [1154110, 1158397] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 527778-528068 bp Feature: domain Description: InsE Location: 527787-528060 bp Feature: domain Description: InsE Location: 52 7787-52 8060 bp Feature: gene Location: 528144-528539 bp Feature: domain Description: PHA02517 Location: 528168-528507 bp Feature: domain Description: PHA02 517 Location: 52 8168-52 8507 bp Feature: gene Location: 529156-530622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529429-530164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 942 9-530164 bp Feature: domain Description: GIIM Note: maturase Location: 530236-530464 bp Feature: domain Description: GIIM Note: maturase Location: 5302 36-530464 bp Feature: gene Location: 530628-531521 bp Feature: domain Description: PRK08181 Location: 530631-531432 bp Feature: domain Description: PRK08181 Location: 530631-531432 bp Feature: gene Location: 531518-533077 bp Feature: domain Description: rve Location: 531953-532343 bp Feature: domain Description: rve Location: 531953-532 343 bp Feature: gene Location: 571123-572292 bp Feature: domain Description: HTH_1 Location: 571396-571567 bp Feature: domain Description: HTH_1 Location: 571396-571567 bp Feature: domain Description: PBP2_CrgA_like_3 Location: 571657-572260 bp Feature: domain Description: PBP2 _CrgA_like_3 Location: 571657-572 2 60 bp Feature: gene Location: 572472-572852 bp Feature: domain Description: Tra5 Location: 572484-572841 bp Feature: domain Description: Tra5 Location: 572 484-572 841 bp Feature: gene Location: 573001-574587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573331-574066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573331-574066 bp Feature: domain Description: GIIM Note: maturase Location: 574138-574366 bp Feature: domain Description: GIIM Note: maturase Location: 574138-574366 bp Feature: gene Location: 574614-575372 bp Feature: domain Description: PRK09183 Location: 574647-575355 bp Feature: domain Description: PRK09183 Location: 574647-575355 bp Feature: gene Location: 575369-576823 bp Feature: domain Description: COG4584 Location: 575375-576179 bp Feature: domain Description: COG4584 Location: 575375-576179 bp Feature: gene Location: 917859-918512 bp Feature: domain Description: Transposase_mut Location: 917862-918429 bp Feature: domain Description: Transposase_mut Location: 917862 -91842 9 bp Feature: gene Location: 918564-919055 bp Feature: domain Description: Transposase_mut Location: 918573-919053 bp Feature: domain Description: Transposase_mut Location: 918573-919053 bp Feature: gene Location: 919542-920951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919896-920583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919896-92 0583 bp Feature: gene Location: 921472-921852 bp Feature: gene Location: 921896-925033 bp Feature: domain Description: 2A0602 Location: 921899-924998 bp Feature: domain Description: 2 A0602 Location: 92 1899-92 4998 bp Feature: gene Location: 1131902-1133416 bp Feature: domain Description: AdhE Location: 1131977-1133405 bp Feature: domain Description: AdhE Location: 1131977-1133405 bp Feature: gene Location: 1133647-1134027 bp Feature: domain Description: PHA02517 Location: 1133653-1134013 bp Feature: domain Description: PHA02 517 Location: 1133653-1134013 bp Feature: gene Location: 1134176-1135705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1134449-1135184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1134449-1135184 bp Feature: domain Description: GIIM Note: maturase Location: 1135256-1135484 bp Feature: domain Description: GIIM Note: maturase Location: 11352 56-1135484 bp Feature: gene Location: 1136322-1136621 bp Feature: domain Description: PHA02517 Location: 1136376-1136589 bp Feature: domain Description: PHA02 517 Location: 1136376-1136589 bp Feature: gene Location: 1136748-1137059 bp Feature: domain Description: InsE Location: 1136751-1137024 bp Feature: domain Description: InsE Location: 1136751-113702 4 bp Feature: gene Location: 1154110-1154838 bp Feature: gene Location: 1154875-1155333 bp Feature: domain Description: PHA02517 Location: 1154878-1155331 bp Feature: domain Description: PHA02 517 Location: 1154878-1155331 bp Feature: gene Location: 1155434-1156963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155707-1156442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155707-1156442 bp Feature: domain Description: GIIM Note: maturase Location: 1156514-1156742 bp Feature: domain Description: GIIM Note: maturase Location: 1156514-1156742 bp Feature: gene Location: 1157580-1158032 bp Feature: domain Description: PHA02517 Location: 1157646-1158000 bp Feature: domain Description: PHA02 517 Location: 1157646-1158000 bp Feature: gene Location: 1158029-1158397 bp Feature: domain Description: InsE Location: 1158035-1158335 bp Feature: domain Description: InsE Location: 1158035-1158335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK08181 (transposase; Validated), rve (pfam00665), HTH_1 (pfam00126), PBP2_CrgA_like_3 (cd08472), Tra5 (COG2801), PRK09183 (transposase/IS protein; Provisional)
COG4584 (Transposase ), Transposase_mut (pfam00872), 2A0602 (TIGR00915), AdhE (COG1012)