myRT

myRT report for GCA_900068905.1_207A_L1_assembly

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Seq: CDRP01000165.1 (3959 bp)
Overview 1 RT 1: 96-3726 bp Neighborhood of RT #1 [96, 3956] PHA02517 RVT-GII GIIM PRK09183 Feature: gene Location: 96-578 bp Feature: domain Description: PHA02517 Location: 159-513 bp Feature: domain Description: PHA0251 7 Location: 1 59-51 3 bp Feature: gene Location: 1170-2693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1443-2175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 443-21 75 bp Feature: domain Description: GIIM Note: maturase Location: 2250-2448 bp Feature: domain Description: GIIM Note: maturase Location: 2250-2448 bp Feature: gene Location: 3063-3956 bp Feature: domain Description: PRK09183 Location: 3066-3726 bp Feature: domain Description: PRK091 83 Location: 3066-3726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK09183 (transposase/IS protein; Provisional)

Seq: CDRP01000690.1 (4137 bp)
Overview 1 RT 1: 1411-4134 bp Neighborhood of RT #1 [1411, 4134] Imm35 RVT-UG11 CbtA_toxin Feature: gene Location: 1411-1575 bp Feature: gene Location: 1775-2059 bp Feature: domain Description: Imm35 Location: 1790-2024 bp Feature: domain Description: Imm35 Location: 1790-2 02 4 bp Feature: gene Location: 2423-3196 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2558-3011 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 558-3011 bp Feature: gene Location: 3509-3838 bp Feature: domain Description: CbtA_toxin Location: 3512-3833 bp Feature: domain Description: CbtA_toxin Location: 3512 -3833 bp Feature: gene Location: 3937-4134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Imm35 (pfam15567), RVT-UG11, CbtA_toxin (pfam06755)

Seq: CDRP01000885.1 (9077 bp)
Overview 1 RT 1: 5826-9075 bp Neighborhood of RT #1 [5826, 9074] PRK15045 cellulose_yhjU RVT-GII PBP2_polyamine_1 Feature: gene Location: 5826-6998 bp Feature: domain Description: PRK15045 Location: 5898-6996 bp Feature: domain Description: PRK15045 Location: 5898-6996 bp Feature: gene Location: 7183-8313 bp Feature: domain Description: cellulose_yhjU Location: 7249-8200 bp Feature: domain Description: cellulose_yhjU Location: 7249-8200 bp Feature: gene Location: 8492-8902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8546-8666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8546-8666 bp Feature: gene Location: 8742-9074 bp Feature: domain Description: PBP2_polyamine_1 Location: 8901-9075 bp Feature: domain Description: PBP2_polyamine_1 Location: 8901-9075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15045 (cellulose biosynthesis protein BcsE; Provisional), cellulose_yhjU (TIGR03368), RVT-GII, PBP2_polyamine_1 (cd13588)