myRT

myRT report for GCA_900076145.1_11983_6_88

Download annotations/find similar RTs

Seq: FKAO01000006.1 (209217 bp)
Overview 1 RT 1: 58-3739 bp Neighborhood of RT #1 [58, 3739] FIDO Arm-DNA-bind_3 INT_P4_C RVT-UG11 Feature: gene Location: 58-462 bp Feature: domain Description: FIDO Location: 118-388 bp Feature: domain Description: FIDO Location: 1 1 8-388 bp Feature: gene Location: 467-1783 bp Feature: domain Description: Arm-DNA-bind_3 Location: 482-758 bp Feature: domain Description: Arm-DNA-bind_3 Location: 482-758 bp Feature: domain Description: INT_P4_C Location: 1172-1724 bp Feature: domain Description: INT_P4_C Location: 1 1 72-1 724 bp Feature: gene Location: 2162-2875 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2240-2693 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2240-2693 bp Feature: gene Location: 2901-3080 bp Feature: gene Location: 3479-3739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIDO (COG2184), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-UG11

Seq: FKAO01000019.1 (73407 bp)
Overview 1 RT 1: 5728-11033 bp 2 RT 2: 55258-58511 bp Neighborhood of RT #1 [5728, 11041] StbA PRK10276 RVT_N RVT-GII GIIM HNHc umuC Neighborhood of RT #2 [55258, 58576] DEDD_Tnp_IS110 RVT-GII GIIM PHA02517 Feature: gene Location: 5728-6702 bp Feature: domain Description: StbA Location: 5734-6679 bp Feature: domain Description: StbA Location: 5734-6679 bp Feature: gene Location: 6931-7065 bp Feature: domain Description: PRK10276 Location: 6982-7045 bp Feature: domain Description: PRK102 76 Location: 6982 -7045 bp Feature: gene Location: 7655-9370 bp Feature: domain Description: RVT_N Location: 7709-7952 bp Feature: domain Description: RVT_N Location: 7709-7952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7997-8648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7997-8648 bp Feature: domain Description: GIIM Note: maturase Location: 8702-8933 bp Feature: domain Description: GIIM Note: maturase Location: 8702 -8933 bp Feature: domain Description: HNHc Note: nucleases Location: 9167-9323 bp Feature: domain Description: HNHc Note: nucleases Location: 9167-932 3 bp Feature: gene Location: 9444-9749 bp Feature: gene Location: 9770-11041 bp Feature: domain Description: umuC Location: 9773-11033 bp Feature: domain Description: umuC Location: 9773-11033 bp Feature: gene Location: 55258-55494 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 55297-55483 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 552 97-55483 bp Feature: gene Location: 55743-55949 bp Feature: gene Location: 56036-57559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56309-57041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56309-57041 bp Feature: domain Description: GIIM Note: maturase Location: 57116-57314 bp Feature: domain Description: GIIM Note: maturase Location: 57116-57314 bp Feature: gene Location: 57513-57938 bp Feature: gene Location: 58151-58576 bp Feature: domain Description: PHA02517 Location: 58175-58511 bp Feature: domain Description: PHA02 517 Location: 58175-58511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), umuC (PRK03609), DEDD_Tnp_IS110 (pfam01548), PHA02517 (putative transposase OrfB; Reviewed)