myRT

myRT report for GCA_900078525.1_lactobacillus_plantarum_BFE5092

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Seq: FJVL01000035.1 (20596 bp)
Overview 1 RT 1: 12823-16485 bp Neighborhood of RT #1 [12823, 16485] RVT-GII RVT-GII GIIM fumC Feature: gene Location: 12823-12960 bp Feature: gene Location: 13088-13240 bp Feature: gene Location: 13302-13640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13410-13632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 341 0-1 3632 bp Feature: gene Location: 13663-14391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13666-14029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3666-1 4029 bp Feature: domain Description: GIIM Note: maturase Location: 14083-14302 bp Feature: domain Description: GIIM Note: maturase Location: 1 4083-1 4302 bp Feature: gene Location: 14949-16331 bp Feature: domain Description: fumC Location: 14952-16320 bp Feature: domain Description: fumC Location: 1 4952-1 6320 bp Feature: gene Location: 16345-16485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), fumC (PRK00485)

Seq: FJVL01000001.1 (425807 bp)
Overview 1 RT 1: 34805-41183 bp Neighborhood of RT #1 [34805, 41233] DegQ PRK00103 RVT-UG12 PHA02517 HTH_28 HTH_28 Feature: gene Location: 34805-36067 bp Feature: domain Description: DegQ Location: 34925-36047 bp Feature: domain Description: DegQ Location: 3492 5-36047 bp Feature: gene Location: 36622-37101 bp Feature: domain Description: PRK00103 Location: 36625-37099 bp Feature: domain Description: PRK00103 Location: 3662 5-37099 bp Feature: gene Location: 37175-38989 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 37694-38141 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 37694-38141 bp Feature: gene Location: 39811-40707 bp Feature: domain Description: PHA02517 Location: 39907-40678 bp Feature: domain Description: PHA02 517 Location: 39907-40678 bp Feature: gene Location: 40817-41233 bp Feature: domain Description: HTH_28 Location: 40883-41039 bp Feature: domain Description: HTH_2 8 Location: 40883-41039 bp Feature: domain Description: HTH_28 Location: 41078-41183 bp Feature: domain Description: HTH_2 8 Location: 41078-41183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), PRK00103 (rRNA large subunit methyltransferase; Provisional), RVT-UG12, PHA02517 (putative transposase OrfB; Reviewed), HTH_28 (pfam13518)