myRT

myRT report for GCA_900078795.1_2013Arg12B

Download annotations/find similar RTs

Seq: FKIM01000123.1 (3830 bp)
Overview 1 RT 1: 544-3828 bp Neighborhood of RT #1 [544, 3828] Exo_endo_phos_2 RVT-UNC Feature: gene Location: 544-3156 bp Feature: domain Description: Exo_endo_phos_2 Location: 628-955 bp Feature: domain Description: Exo_endo_phos_2 Location: 628-955 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1858-2482 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 858-2482 bp Feature: gene Location: 3460-3681 bp Feature: gene Location: 3685-3828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FKIM01000103.1 (4451 bp)
Overview 1 RT 1: 2175-4420 bp Neighborhood of RT #1 [2175, 4449] L1-EN MnuA_DNase1-like RVT-UNC Feature: gene Location: 2175-2726 bp Feature: domain Description: L1-EN Location: 2394-2718 bp Feature: domain Description: L1-EN Location: 2 394-2 718 bp Feature: gene Location: 2742-3440 bp Feature: domain Description: MnuA_DNase1-like Location: 2754-3015 bp Feature: domain Description: MnuA_DNase1-like Location: 2 754-3015 bp Feature: gene Location: 3427-4449 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3919-4420 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3919-442 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), MnuA_DNase1-like (cd10283), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FKIM01000294.1 (1828 bp)
Overview 1 RT 1: 11-1789 bp Neighborhood of RT #1 [11, 1827] L1-EN RVT-GII Feature: gene Location: 11-1342 bp Feature: domain Description: L1-EN Location: 20-611 bp Feature: domain Description: L1-EN Location: 20-611 bp Feature: gene Location: 1378-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1486-1789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1486-1789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII

Seq: FKIM01000303.1 (1803 bp)
Overview 1 RT 1: 26-946 bp Neighborhood of RT #1 [26, 1800] RVT-GII R1-I-EN Feature: gene Location: 26-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 -4 64 bp Feature: gene Location: 631-1800 bp Feature: domain Description: R1-I-EN Location: 640-946 bp Feature: domain Description: R1-I-EN Location: 64 0-94 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, R1-I-EN (cd09077)

Seq: FKIM01000355.1 (1561 bp)
Overview 1 RT 1: 412-1285 bp Neighborhood of RT #1 [412, 1401] RVT-UNC Feature: gene Location: 412-1401 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 601-1285 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 601-1285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-UG11(RVT-UNC)

Seq: FKIM01000193.1 (2555 bp)
Overview 1 RT 1: 3-1401 bp Neighborhood of RT #1 [3, 2081] RVT-UNC Feature: gene Location: 3-2081 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 786-1401 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 786 -1401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FKIM01000232.1 (2189 bp)
Overview 1 RT 1: 3-1968 bp Neighborhood of RT #1 [3, 1968] RVT-UNC RT_nLTR_like Feature: gene Location: 3-1400 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 51-354 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 51-354 bp Feature: gene Location: 1435-1611 bp Feature: domain Description: RT_nLTR_like Location: 1450-1609 bp Feature: domain Description: RT_nLTR_like Location: 1450-1609 bp Feature: gene Location: 1693-1968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-GII/RVT-Retrons/RVT-UG11(RVT-UNC), RT_nLTR_like (cd01650)

Seq: FKIM01000365.1 (1534 bp)
Overview 1 RT 1: 3-1524 bp Neighborhood of RT #1 [3, 1532] RVT-DGRs GIY-YIG_PLEs Feature: gene Location: 3-1532 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 222-666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 222-666 bp Feature: domain Description: GIY-YIG_PLEs Location: 1293-1524 bp Feature: domain Description: GIY-YIG_PLEs Location: 1293-1524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, GIY-YIG_PLEs (cd10442)

Seq: FKIM01000175.1 (2755 bp)
Overview 1 RT 1: 299-2304 bp Neighborhood of RT #1 [299, 2753] RVT-GII Exo_endo_phos_2 Feature: gene Location: 299-856 bp Feature: gene Location: 962-1462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1424 bp Feature: gene Location: 1732-1872 bp Feature: gene Location: 1950-2753 bp Feature: domain Description: Exo_endo_phos_2 Location: 2040-2304 bp Feature: domain Description: Exo_endo_phos_2 Location: 2040-2304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Exo_endo_phos_2 (pfam14529)

Seq: FKIM01000593.1 (1106 bp)
Overview 1 RT 1: 3-724 bp Neighborhood of RT #1 [3, 1104] RVT-GII Feature: gene Location: 3-200 bp Feature: gene Location: 349-1104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FKIM01000402.1 (1411 bp)
Overview 1 RT 1: 1-1410 bp Neighborhood of RT #1 [1, 1410] RVT-CRISPR-like Feature: gene Location: 1-198 bp Feature: gene Location: 369-662 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 378-630 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 378-630 bp Feature: gene Location: 808-1410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FKIM01000308.1 (1785 bp)
Overview 1 RT 1: 1-1672 bp Neighborhood of RT #1 [1, 1782] L1-EN RVT-GII Feature: gene Location: 1-1782 bp Feature: domain Description: L1-EN Location: 7-142 bp Feature: domain Description: L1-EN Location: 7-142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024-1672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024-1672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII

Seq: FKIM01000378.1 (1495 bp)
Overview 1 RT 1: 1-1492 bp Neighborhood of RT #1 [1, 1494] RVT-DGRs GIY-YIG_PLEs Feature: gene Location: 1-1494 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 322-757 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 322-757 bp Feature: domain Description: GIY-YIG_PLEs Location: 1393-1492 bp Feature: domain Description: GIY-YIG_PLEs Location: 13 93-1492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, GIY-YIG_PLEs (cd10442)

Seq: FKIM01000412.1 (1396 bp)
Overview 1 RT 1: 237-1395 bp Neighborhood of RT #1 [237, 1395] RVT-GII Feature: gene Location: 237-887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273-813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273-813 bp Feature: gene Location: 982-1395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FKIM01000436.1 (1328 bp)
Overview 1 RT 1: 2-803 bp Neighborhood of RT #1 [2, 1219] RVT-CRISPR-like Feature: gene Location: 2-1219 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 149-803 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 149-803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR