myRT

myRT report for GCA_900080095.1_Isolate_22

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Seq: FKLM01000162.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 054-1 792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-251 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: FKLM01000155.1 (2997 bp)
Overview 1 RT 1: 259-2994 bp Neighborhood of RT #1 [259, 2994] RVT-GII HNHc Feature: gene Location: 259-2136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574-1312 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2023 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2 02 3 bp Feature: gene Location: 2323-2556 bp Feature: gene Location: 2824-2994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: FKLM01000046.1 (22701 bp)
Overview 1 RT 1: 15130-20670 bp Neighborhood of RT #1 [15130, 20696] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 15130-15474 bp Feature: domain Description: RelB_DinJ Location: 15340-15466 bp Feature: domain Description: RelB_DinJ Location: 153 40-15466 bp Feature: gene Location: 15543-16559 bp Feature: domain Description: FtsK_SpoIIIE Location: 16200-16440 bp Feature: domain Description: FtsK_SpoIIIE Location: 16200-16440 bp Feature: gene Location: 17153-19027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17519-18215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17519-18215 bp Feature: domain Description: HNHc Note: nucleases Location: 18755-18914 bp Feature: domain Description: HNHc Note: nucleases Location: 18755-18914 bp Feature: gene Location: 19129-19509 bp Feature: domain Description: FtsK Location: 19144-19384 bp Feature: domain Description: FtsK Location: 19144-193 84 bp Feature: gene Location: 19554-20696 bp Feature: domain Description: Dcm Location: 19557-20670 bp Feature: domain Description: Dcm Location: 19557-20670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: FKLM01000007.1 (96748 bp)
Overview 1 RT 1: 68963-74824 bp Neighborhood of RT #1 [68963, 74835] PRK09362 RVT-GII GIIM Adenylsuccinate_lyase_1 PRK06019 Feature: gene Location: 68963-69691 bp Feature: domain Description: PRK09362 Location: 68966-69668 bp Feature: domain Description: PRK09362 Location: 68966-69668 bp Feature: gene Location: 69947-70324 bp Feature: gene Location: 70893-72281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71214-71829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71214 -71829 bp Feature: domain Description: GIIM Note: maturase Location: 71886-72102 bp Feature: domain Description: GIIM Note: maturase Location: 71886-72102 bp Feature: gene Location: 72403-73698 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 72415-73684 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 724 15-73684 bp Feature: gene Location: 73711-74835 bp Feature: domain Description: PRK06019 Location: 73735-74824 bp Feature: domain Description: PRK06019 Location: 73735-74 824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), RVT-GII, GIIM (pfam08388), Adenylsuccinate_lyase_1 (cd01360), PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed)

Seq: FKLM01000158.1 (2902 bp)
Overview 1 RT 1: 3-2298 bp Neighborhood of RT #1 [3, 2298] RVT-AbiP2 DUF3841 Feature: gene Location: 3-1325 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 411-867 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 411-867 bp Feature: gene Location: 1503-1982 bp Feature: domain Description: DUF3841 Location: 1512-1887 bp Feature: domain Description: DUF3841 Location: 15 12-1887 bp Feature: gene Location: 2149-2298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, DUF3841 (pfam12952)