myRT

myRT report for GCA_900080205.1_lactobacillus_plantarum_BFE5092

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Seq: FKLQ01000008.1 (189939 bp)
Overview 1 RT 1: 182184-185846 bp Neighborhood of RT #1 [182184, 185846] RVT-GII RVT-GII GIIM fumC Feature: gene Location: 182184-182321 bp Feature: gene Location: 182449-182601 bp Feature: gene Location: 182663-183001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182771-182993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 82771 -1 82993 bp Feature: gene Location: 183024-183752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183027-183390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 83027-1 83390 bp Feature: domain Description: GIIM Note: maturase Location: 183444-183663 bp Feature: domain Description: GIIM Note: maturase Location: 1 83444-1 83663 bp Feature: gene Location: 184310-185692 bp Feature: domain Description: fumC Location: 184313-185681 bp Feature: domain Description: fumC Location: 1 8431 3-1 85681 bp Feature: gene Location: 185706-185846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), fumC (PRK00485)

Seq: FKLQ01000002.1 (427141 bp)
Overview 1 RT 1: 34993-41371 bp Neighborhood of RT #1 [34993, 41421] DegQ PRK00103 RVT-UG12 PHA02517 HTH_28 HTH_28 Feature: gene Location: 34993-36255 bp Feature: domain Description: DegQ Location: 35113-36235 bp Feature: domain Description: DegQ Location: 35113-362 35 bp Feature: gene Location: 36810-37289 bp Feature: domain Description: PRK00103 Location: 36813-37287 bp Feature: domain Description: PRK00103 Location: 36813-372 87 bp Feature: gene Location: 37363-39177 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 37882-38329 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 37882 -3832 9 bp Feature: gene Location: 39999-40895 bp Feature: domain Description: PHA02517 Location: 40095-40866 bp Feature: domain Description: PHA02 517 Location: 40095-40866 bp Feature: gene Location: 41005-41421 bp Feature: domain Description: HTH_28 Location: 41071-41227 bp Feature: domain Description: HTH_2 8 Location: 41071-412 2 7 bp Feature: domain Description: HTH_28 Location: 41266-41371 bp Feature: domain Description: HTH_2 8 Location: 412 66-41371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), PRK00103 (rRNA large subunit methyltransferase; Provisional), RVT-UG12, PHA02517 (putative transposase OrfB; Reviewed), HTH_28 (pfam13518)