myRT

myRT report for GCA_900084045.1_12082_5_29

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Seq: FLAI01000033.1 (36374 bp)
Overview 1 RT 1: 26043-31772 bp Neighborhood of RT #1 [26043, 32089] SmpB PRK09692 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 26043-26525 bp Feature: domain Description: SmpB Location: 26073-26517 bp Feature: domain Description: SmpB Location: 26073-2651 7 bp Feature: gene Location: 27236-28477 bp Feature: domain Description: PRK09692 Location: 27239-28475 bp Feature: domain Description: PRK09692 Location: 27239-28475 bp Feature: gene Location: 28910-29893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29039-29636 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29039-29636 bp Feature: gene Location: 29874-31460 bp Feature: domain Description: COG3950 Location: 30054-31269 bp Feature: domain Description: COG3950 Location: 30054-31 269 bp Feature: gene Location: 31457-32089 bp Feature: domain Description: TIGR02646 Location: 31547-31772 bp Feature: domain Description: TIGR02646 Location: 31 547-31 772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: FLAI01000034.1 (36217 bp)
Overview 1 RT 1: 23286-26592 bp Neighborhood of RT #1 [23286, 26705] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 23286-23564 bp Feature: domain Description: InsE Location: 23298-23556 bp Feature: domain Description: InsE Location: 2 32 98-2 3556 bp Feature: gene Location: 23621-24031 bp Feature: domain Description: PHA02517 Location: 23627-23966 bp Feature: domain Description: PHA02 517 Location: 2 362 7-2 3966 bp Feature: gene Location: 24332-25087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24440-24569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4440-2 4569 bp Feature: domain Description: GIIM Note: maturase Location: 24683-24863 bp Feature: domain Description: GIIM Note: maturase Location: 2 4683-2 4863 bp Feature: gene Location: 25210-25410 bp Feature: domain Description: PHA02517 Location: 25213-25375 bp Feature: domain Description: PHA02 517 Location: 2 52 13-2 5375 bp Feature: gene Location: 25629-26705 bp Feature: domain Description: COG3547 Location: 25668-26592 bp Feature: domain Description: COG3547 Location: 2 5668-2 6592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )