myRT

myRT report for GCA_900084415.1_11983_8_25

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Seq: FLBL01000030.1 (28089 bp)
Overview 1 RT 1: 20089-23297 bp Neighborhood of RT #1 [20089, 23297] PRK10276 RVT-GII Feature: gene Location: 20089-20514 bp Feature: domain Description: PRK10276 Location: 20092-20500 bp Feature: domain Description: PRK1 0276 Location: 20092-20500 bp Feature: gene Location: 20632-20865 bp Feature: gene Location: 20916-22451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21321-22059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 321 -22059 bp Feature: gene Location: 22685-22915 bp Feature: gene Location: 22974-23297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: FLBL01000025.1 (55620 bp)
Overview 1 RT 1: 8423-12191 bp Neighborhood of RT #1 [8423, 12191] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 8423-8701 bp Feature: domain Description: InsE Location: 8435-8693 bp Feature: domain Description: InsE Location: 8435-8693 bp Feature: gene Location: 8758-9168 bp Feature: domain Description: PHA02517 Location: 8764-9103 bp Feature: domain Description: PHA02 517 Location: 8764-9103 bp Feature: gene Location: 9760-11283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10033-10765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10033-10765 bp Feature: domain Description: GIIM Note: maturase Location: 10840-11038 bp Feature: domain Description: GIIM Note: maturase Location: 10840-11038 bp Feature: gene Location: 11406-11840 bp Feature: domain Description: PHA02517 Location: 11409-11832 bp Feature: domain Description: PHA02 517 Location: 11409-11832 bp Feature: gene Location: 11856-12191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FLBL01000035.1 (21017 bp)
Overview 1 RT 1: 5601-8809 bp Neighborhood of RT #1 [5601, 8826] RVT-GII PRK10276 Feature: gene Location: 5601-6032 bp Feature: gene Location: 6164-6433 bp Feature: gene Location: 6502-7989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6907-7597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6907-7597 bp Feature: gene Location: 8014-8826 bp Feature: domain Description: PRK10276 Location: 8446-8809 bp Feature: domain Description: PRK10276 Location: 8446-8809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FLBL01000015.1 (151851 bp)
Overview 1 RT 1: 112836-119704 bp Neighborhood of RT #1 [112836, 119706] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112836-113564 bp Feature: domain Description: FimC Location: 112884-113547 bp Feature: domain Description: FimC Location: 112884 -11354 7 bp Feature: gene Location: 113596-116205 bp Feature: domain Description: FimD Location: 113653-116194 bp Feature: domain Description: FimD Location: 113653-116194 bp Feature: gene Location: 116205-118283 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116613-117057 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116613-117057 bp Feature: gene Location: 118340-118780 bp Feature: domain Description: Integrase_1 Location: 118346-118562 bp Feature: domain Description: Integrase_1 Location: 11834 6-118562 bp Feature: gene Location: 119041-119706 bp Feature: domain Description: INT_P4_C Location: 119146-119704 bp Feature: domain Description: INT_P4 _C Location: 11914 6-119704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)