myRT

myRT report for GCA_900084505.1_11983_8_68

Download annotations/find similar RTs

Seq: FLCA01000034.1 (17169 bp)
Overview 1 RT 1: 1844-5092 bp Neighborhood of RT #1 [1844, 5106] RVT-GII PRK10276 Feature: gene Location: 1844-2065 bp Feature: gene Location: 2327-2557 bp Feature: gene Location: 2791-4278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3196-3886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 96-3886 bp Feature: gene Location: 4284-4451 bp Feature: gene Location: 4681-5106 bp Feature: domain Description: PRK10276 Location: 4684-5092 bp Feature: domain Description: PRK1 0276 Location: 4684-5092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FLCA01000010.1 (199718 bp)
Overview 1 RT 1: 110236-117089 bp Neighborhood of RT #1 [110236, 117106] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 110236-110901 bp Feature: domain Description: INT_P4_C Location: 110341-110899 bp Feature: domain Description: INT_P4_C Location: 110341-110899 bp Feature: gene Location: 111162-111602 bp Feature: domain Description: Integrase_1 Location: 111168-111384 bp Feature: domain Description: Integrase_1 Location: 111168-111384 bp Feature: gene Location: 111659-113737 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 112067-112511 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 112 067-112 511 bp Feature: gene Location: 113737-116346 bp Feature: domain Description: FimD Location: 113794-116335 bp Feature: domain Description: FimD Location: 113794-116335 bp Feature: gene Location: 116378-117106 bp Feature: domain Description: FimC Location: 116426-117089 bp Feature: domain Description: FimC Location: 11642 6-117089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)