myRT

myRT report for GCA_900084615.1_11983_8_85

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Seq: FLCO01000026.1 (64874 bp)
Overview 1 RT 1: 8548-13891 bp Neighborhood of RT #1 [8548, 13905] umuC PRK10276 RVT-GII PRK10276 umuC Feature: gene Location: 8548-9819 bp Feature: domain Description: umuC Location: 8551-9811 bp Feature: domain Description: umuC Location: 8551 -981 1 bp Feature: gene Location: 9819-10631 bp Feature: domain Description: PRK10276 Location: 10251-10614 bp Feature: domain Description: PRK1 0276 Location: 1 0251 -1 061 4 bp Feature: gene Location: 10656-12143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11061-11751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 061 -1 1 751 bp Feature: gene Location: 12218-12652 bp Feature: domain Description: PRK10276 Location: 12257-12632 bp Feature: domain Description: PRK1 0276 Location: 1 2257-1 2632 bp Feature: gene Location: 12640-13905 bp Feature: domain Description: umuC Location: 12643-13891 bp Feature: domain Description: umuC Location: 1 2643-1 3891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: FLCO01000004.1 (353742 bp)
Overview 1 RT 1: 234048-240901 bp Neighborhood of RT #1 [234048, 240918] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 234048-234713 bp Feature: domain Description: INT_P4_C Location: 234153-234711 bp Feature: domain Description: INT_P4_C Location: 2 34153-2 34711 bp Feature: gene Location: 234974-235414 bp Feature: domain Description: Integrase_1 Location: 234980-235196 bp Feature: domain Description: Integrase_1 Location: 2 34980-2 35196 bp Feature: gene Location: 235471-237549 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 235879-236323 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 35879-2 3632 3 bp Feature: gene Location: 237549-240158 bp Feature: domain Description: FimD Location: 237606-240147 bp Feature: domain Description: FimD Location: 2 37606-2 40147 bp Feature: gene Location: 240190-240918 bp Feature: domain Description: FimC Location: 240238-240901 bp Feature: domain Description: FimC Location: 2 402 38-2 40901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FLCO01000038.1 (14488 bp)
Overview 1 RT 1: 4693-7963 bp Neighborhood of RT #1 [4693, 7977] RVT-GII PRK10276 Feature: gene Location: 4693-4908 bp Feature: gene Location: 5175-5405 bp Feature: gene Location: 5639-7150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6044-6758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6044-6758 bp Feature: gene Location: 7201-7434 bp Feature: gene Location: 7552-7977 bp Feature: domain Description: PRK10276 Location: 7555-7963 bp Feature: domain Description: PRK10276 Location: 7555-7963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)