myRT

myRT report for GCA_900084665.1_12045_5_84

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Seq: FLCT01000011.1 (173799 bp)
Overview 1 RT 1: 134542-141410 bp Neighborhood of RT #1 [134542, 141412] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 134542-135270 bp Feature: domain Description: FimC Location: 134590-135253 bp Feature: domain Description: FimC Location: 1 34590-1 35253 bp Feature: gene Location: 135302-137911 bp Feature: domain Description: FimD Location: 135359-137900 bp Feature: domain Description: FimD Location: 1 35359-1 37900 bp Feature: gene Location: 137911-139989 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 138319-138763 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 3831 9-1 38763 bp Feature: gene Location: 140046-140486 bp Feature: domain Description: Integrase_1 Location: 140052-140268 bp Feature: domain Description: Integrase_1 Location: 1 40052-1 40268 bp Feature: gene Location: 140747-141412 bp Feature: domain Description: INT_P4_C Location: 140852-141410 bp Feature: domain Description: INT_P4_C Location: 1 40852-1 41 41 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FLCT01000029.1 (11909 bp)
Overview 1 RT 1: 3219-6489 bp Neighborhood of RT #1 [3219, 6503] RVT-GII PRK10276 Feature: gene Location: 3219-3434 bp Feature: gene Location: 3701-3931 bp Feature: gene Location: 4165-5676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4570-5284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4570-52 84 bp Feature: gene Location: 5727-5960 bp Feature: gene Location: 6078-6503 bp Feature: domain Description: PRK10276 Location: 6081-6489 bp Feature: domain Description: PRK102 76 Location: 6081-6489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)