myRT

myRT report for GCA_900085195.1_12045_6_92

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Seq: FLEU01000032.1 (7384 bp)
Overview 1 RT 1: 66-3214 bp Neighborhood of RT #1 [66, 3279] RVT-GII GIIM PHA02517 Feature: gene Location: 66-197 bp Feature: gene Location: 446-652 bp Feature: gene Location: 739-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 2-1 744 bp Feature: domain Description: GIIM Note: maturase Location: 1819-2017 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 9-201 7 bp Feature: gene Location: 2216-2641 bp Feature: gene Location: 2854-3279 bp Feature: domain Description: PHA02517 Location: 2878-3214 bp Feature: domain Description: PHA0251 7 Location: 2878-321 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: FLEU01000014.1 (151848 bp)
Overview 1 RT 1: 112829-119697 bp Neighborhood of RT #1 [112829, 119699] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112829-113557 bp Feature: domain Description: FimC Location: 112877-113540 bp Feature: domain Description: FimC Location: 112 877-113540 bp Feature: gene Location: 113589-116198 bp Feature: domain Description: FimD Location: 113646-116187 bp Feature: domain Description: FimD Location: 113646-116187 bp Feature: gene Location: 116198-118276 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116606-117050 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116606-117050 bp Feature: gene Location: 118333-118773 bp Feature: domain Description: Integrase_1 Location: 118339-118555 bp Feature: domain Description: Integrase_1 Location: 118339-118555 bp Feature: gene Location: 119034-119699 bp Feature: domain Description: INT_P4_C Location: 119139-119697 bp Feature: domain Description: INT_P4_C Location: 119139-119697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FLEU01000006.1 (307282 bp)
Overview 1 RT 1: 170929-175036 bp Neighborhood of RT #1 [170929, 175038] DinI RVT-GII PRK10276 umuC Feature: gene Location: 170929-171171 bp Feature: domain Description: DinI Location: 170980-171160 bp Feature: domain Description: DinI Location: 170980-171160 bp Feature: gene Location: 171186-171332 bp Feature: gene Location: 171785-173272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172190-172880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172190-172880 bp Feature: gene Location: 173351-173770 bp Feature: domain Description: PRK10276 Location: 173354-173765 bp Feature: domain Description: PRK10276 Location: 173 3 54-173 765 bp Feature: gene Location: 173773-175038 bp Feature: domain Description: umuC Location: 173776-175036 bp Feature: domain Description: umuC Location: 173 776-17503 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)