myRT

myRT report for GCA_900085575.1_12045_7_44

Download annotations/find similar RTs

Seq: FLGG01000034.1 (18213 bp)
Overview 1 RT 1: 109-3696 bp Neighborhood of RT #1 [109, 3704] RVT-GII PRK10276 umuC Feature: gene Location: 109-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 4-1 204 bp Feature: gene Location: 1621-2433 bp Feature: domain Description: PRK10276 Location: 2053-2416 bp Feature: domain Description: PRK1 0276 Location: 2053-241 6 bp Feature: gene Location: 2433-3704 bp Feature: domain Description: umuC Location: 2436-3696 bp Feature: domain Description: umuC Location: 2436-3696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: FLGG01000015.1 (151848 bp)
Overview 1 RT 1: 112829-119697 bp Neighborhood of RT #1 [112829, 119699] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112829-113557 bp Feature: domain Description: FimC Location: 112877-113540 bp Feature: domain Description: FimC Location: 112 877-113540 bp Feature: gene Location: 113589-116198 bp Feature: domain Description: FimD Location: 113646-116187 bp Feature: domain Description: FimD Location: 113646-116187 bp Feature: gene Location: 116198-118276 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116606-117050 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116606-117050 bp Feature: gene Location: 118333-118773 bp Feature: domain Description: Integrase_1 Location: 118339-118555 bp Feature: domain Description: Integrase_1 Location: 118339-118555 bp Feature: gene Location: 119034-119699 bp Feature: domain Description: INT_P4_C Location: 119139-119697 bp Feature: domain Description: INT_P4_C Location: 119139-119697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FLGG01000030.1 (29882 bp)
Overview 1 RT 1: 12837-16661 bp Neighborhood of RT #1 [12837, 16819] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 12837-13139 bp Feature: domain Description: InsE Location: 12846-13128 bp Feature: domain Description: InsE Location: 12846-13 128 bp Feature: gene Location: 13166-13591 bp Feature: domain Description: PHA02517 Location: 13190-13526 bp Feature: domain Description: PHA02517 Location: 13 190-13 526 bp Feature: gene Location: 14183-15706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14456-15188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14456-15188 bp Feature: domain Description: GIIM Note: maturase Location: 15263-15461 bp Feature: domain Description: GIIM Note: maturase Location: 15263 -15461 bp Feature: gene Location: 15793-15978 bp Feature: gene Location: 16130-16819 bp Feature: domain Description: Tra5 Location: 16235-16661 bp Feature: domain Description: Tra5 Location: 1623 5-16661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)