myRT

myRT report for GCA_900086025.1_12082_2_22

Download annotations/find similar RTs

Seq: FLHZ01000017.1 (86833 bp)
Overview 1 RT 1: 43360-46615 bp Neighborhood of RT #1 [43360, 46617] RVT-GII HTH_Tnp_ISL3 Feature: gene Location: 43360-43521 bp Feature: gene Location: 43842-44072 bp Feature: gene Location: 44306-45793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44711-45401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4471 1 -45401 bp Feature: gene Location: 45844-46077 bp Feature: gene Location: 46453-46617 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 46513-46615 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 4651 3-4661 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_Tnp_ISL3 (pfam13542)

Seq: FLHZ01000032.1 (16198 bp)
Overview 1 RT 1: 10410-14852 bp Neighborhood of RT #1 [10410, 14854] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 10410-11681 bp Feature: domain Description: umuC Location: 10413-11673 bp Feature: domain Description: umuC Location: 10413-11673 bp Feature: gene Location: 11681-12364 bp Feature: domain Description: PRK10276 Location: 11984-12347 bp Feature: domain Description: PRK102 76 Location: 11984-12 347 bp Feature: gene Location: 12518-14005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12923-13613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 92 3-13613 bp Feature: gene Location: 14157-14432 bp Feature: domain Description: InsA Location: 14160-14424 bp Feature: domain Description: InsA Location: 14160-1442 4 bp Feature: gene Location: 14351-14854 bp Feature: domain Description: DDE_Tnp_IS1 Location: 14462-14852 bp Feature: domain Description: DDE_Tnp_IS1 Location: 14462 -14852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: FLHZ01000014.1 (146524 bp)
Overview 1 RT 1: 32152-39005 bp Neighborhood of RT #1 [32152, 39022] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32152-32817 bp Feature: domain Description: INT_P4_C Location: 32257-32815 bp Feature: domain Description: INT_P4_C Location: 3 2257-3 2815 bp Feature: gene Location: 33078-33518 bp Feature: domain Description: Integrase_1 Location: 33084-33300 bp Feature: domain Description: Integrase_1 Location: 3 3 084-3 3 3 00 bp Feature: gene Location: 33575-35653 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33983-34427 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 983 -3 4427 bp Feature: gene Location: 35653-38262 bp Feature: domain Description: FimD Location: 35710-38251 bp Feature: domain Description: FimD Location: 3 5710-3 8251 bp Feature: gene Location: 38294-39022 bp Feature: domain Description: FimC Location: 38342-39005 bp Feature: domain Description: FimC Location: 3 83 42-3 9005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)