myRT

myRT report for GCA_900086195.1_12082_4_86

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Seq: FLIR01000002.1 (410907 bp)
Overview 1 RT 1: 4699-7993 bp Neighborhood of RT #1 [4699, 8007] RVT-GII PRK10276 Feature: gene Location: 4699-4914 bp Feature: gene Location: 5181-5759 bp Feature: gene Location: 5645-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6047-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6047-6785 bp Feature: gene Location: 7231-7464 bp Feature: gene Location: 7582-8007 bp Feature: domain Description: PRK10276 Location: 7585-7993 bp Feature: domain Description: PRK1 0276 Location: 7585-7993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FLIR01000010.1 (223279 bp)
Overview 1 RT 1: 103579-110432 bp Neighborhood of RT #1 [103579, 110449] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 103579-104244 bp Feature: domain Description: INT_P4_C Location: 103684-104242 bp Feature: domain Description: INT_P4_C Location: 103684-1042 42 bp Feature: gene Location: 104505-104945 bp Feature: domain Description: Integrase_1 Location: 104511-104727 bp Feature: domain Description: Integrase_1 Location: 104511-10472 7 bp Feature: gene Location: 105002-107080 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 105410-105854 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 105410-105854 bp Feature: gene Location: 107080-109689 bp Feature: domain Description: FimD Location: 107137-109678 bp Feature: domain Description: FimD Location: 107137-109678 bp Feature: gene Location: 109721-110449 bp Feature: domain Description: FimC Location: 109769-110432 bp Feature: domain Description: FimC Location: 109769-110432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FLIR01000048.1 (3298 bp)
Overview 1 RT 1: 1-3232 bp Neighborhood of RT #1 [1, 3232] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-444 bp Feature: domain Description: PHA02517 Location: 43-379 bp Feature: domain Description: PHA02517 Location: 43 -3 79 bp Feature: gene Location: 1036-2559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1309-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 09-2041 bp Feature: domain Description: GIIM Note: maturase Location: 2116-2314 bp Feature: domain Description: GIIM Note: maturase Location: 2116-23 14 bp Feature: gene Location: 2724-2882 bp Feature: domain Description: PHA02517 Location: 2727-2847 bp Feature: domain Description: PHA02517 Location: 2727-2847 bp Feature: gene Location: 3101-3232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FLIR01000036.1 (16528 bp)
Overview 1 RT 1: 337-5359 bp Neighborhood of RT #1 [337, 5367] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 337-1302 bp Feature: domain Description: ArdC Location: 463-1297 bp Feature: domain Description: ArdC Location: 4 63-1297 bp Feature: gene Location: 1434-1703 bp Feature: gene Location: 1772-3259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2177-2867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2177-2867 bp Feature: gene Location: 3284-4096 bp Feature: domain Description: PRK10276 Location: 3716-4079 bp Feature: domain Description: PRK10276 Location: 3716-4 079 bp Feature: gene Location: 4096-5367 bp Feature: domain Description: umuC Location: 4099-5359 bp Feature: domain Description: umuC Location: 4 099-5359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)