myRT

myRT report for GCA_900086295.1_12082_4_95

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Seq: FLJA01000030.1 (27765 bp)
Overview 1 RT 1: 19787-22971 bp Neighborhood of RT #1 [19787, 22971] PRK10276 RVT-GII Feature: gene Location: 19787-20212 bp Feature: domain Description: PRK10276 Location: 19790-20198 bp Feature: domain Description: PRK1 0276 Location: 1 9790-201 98 bp Feature: gene Location: 20330-20563 bp Feature: gene Location: 20614-22125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21019-21733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 01 9-21 733 bp Feature: gene Location: 22359-22589 bp Feature: gene Location: 22648-22971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: FLJA01000016.1 (151854 bp)
Overview 1 RT 1: 112837-119705 bp Neighborhood of RT #1 [112837, 119707] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112837-113565 bp Feature: domain Description: FimC Location: 112885-113548 bp Feature: domain Description: FimC Location: 112 885-113548 bp Feature: gene Location: 113597-116206 bp Feature: domain Description: FimD Location: 113654-116195 bp Feature: domain Description: FimD Location: 113654-116195 bp Feature: gene Location: 116206-118284 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116614-117058 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116614-117058 bp Feature: gene Location: 118341-118781 bp Feature: domain Description: Integrase_1 Location: 118347-118563 bp Feature: domain Description: Integrase_1 Location: 118347-118563 bp Feature: gene Location: 119042-119707 bp Feature: domain Description: INT_P4_C Location: 119147-119705 bp Feature: domain Description: INT_P4_C Location: 119147-119705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FLJA01000033.1 (16876 bp)
Overview 1 RT 1: 3831-8319 bp Neighborhood of RT #1 [3831, 8327] RVT-GII PRK10276 umuC Feature: gene Location: 3831-4262 bp Feature: gene Location: 4394-4663 bp Feature: gene Location: 4732-6219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5137-5827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513 7-5827 bp Feature: gene Location: 6373-7056 bp Feature: domain Description: PRK10276 Location: 6676-7039 bp Feature: domain Description: PRK10276 Location: 6676-703 9 bp Feature: gene Location: 7056-8327 bp Feature: domain Description: umuC Location: 7059-8319 bp Feature: domain Description: umuC Location: 7059-83 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)