myRT

myRT report for GCA_900086475.1_12082_5_17

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Seq: FLJT01000013.1 (146518 bp)
Overview 1 RT 1: 107497-114365 bp Neighborhood of RT #1 [107497, 114367] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 107497-108225 bp Feature: domain Description: FimC Location: 107545-108208 bp Feature: domain Description: FimC Location: 1 07545-1 08208 bp Feature: gene Location: 108257-110866 bp Feature: domain Description: FimD Location: 108314-110855 bp Feature: domain Description: FimD Location: 1 0831 4-1 1 0855 bp Feature: gene Location: 110866-112944 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 111274-111718 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 1 274-1 1 1 71 8 bp Feature: gene Location: 113001-113441 bp Feature: domain Description: Integrase_1 Location: 113007-113223 bp Feature: domain Description: Integrase_1 Location: 1 1 3007-1 1 3223 bp Feature: gene Location: 113702-114367 bp Feature: domain Description: INT_P4_C Location: 113807-114365 bp Feature: domain Description: INT_P4_C Location: 1 1 3807-1 1 4365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FLJT01000043.1 (16012 bp)
Overview 1 RT 1: 10402-14844 bp Neighborhood of RT #1 [10402, 14846] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 10402-11673 bp Feature: domain Description: umuC Location: 10405-11665 bp Feature: domain Description: umuC Location: 10405-11665 bp Feature: gene Location: 11673-12485 bp Feature: domain Description: PRK10276 Location: 12105-12468 bp Feature: domain Description: PRK102 76 Location: 12 105-12 468 bp Feature: gene Location: 12510-13997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12915-13605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 915-13605 bp Feature: gene Location: 14149-14424 bp Feature: domain Description: InsA Location: 14152-14416 bp Feature: domain Description: InsA Location: 14152 -14416 bp Feature: gene Location: 14343-14846 bp Feature: domain Description: DDE_Tnp_IS1 Location: 14454-14844 bp Feature: domain Description: DDE_Tnp_IS1 Location: 14454-14844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)