myRT

myRT report for GCA_900086485.1_12082_5_23

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Seq: FLJR01000015.1 (151858 bp)
Overview 1 RT 1: 112831-119699 bp Neighborhood of RT #1 [112831, 119701] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112831-113559 bp Feature: domain Description: FimC Location: 112879-113542 bp Feature: domain Description: FimC Location: 1 1 2879-1 1 3542 bp Feature: gene Location: 113591-116200 bp Feature: domain Description: FimD Location: 113648-116189 bp Feature: domain Description: FimD Location: 1 1 3648-1 1 61 89 bp Feature: gene Location: 116200-118278 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116608-117052 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6608-1 1 7052 bp Feature: gene Location: 118335-118775 bp Feature: domain Description: Integrase_1 Location: 118341-118557 bp Feature: domain Description: Integrase_1 Location: 1 1 8341 -1 1 8557 bp Feature: gene Location: 119036-119701 bp Feature: domain Description: INT_P4_C Location: 119141-119699 bp Feature: domain Description: INT_P4_C Location: 1 1 91 41 -1 1 9699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FLJR01000025.1 (20996 bp)
Overview 1 RT 1: 13624-16795 bp Neighborhood of RT #1 [13624, 16797] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 13624-14307 bp Feature: domain Description: PRK10276 Location: 13927-14290 bp Feature: domain Description: PRK102 76 Location: 1392 7-142 90 bp Feature: gene Location: 14361-14963 bp Feature: gene Location: 14938-15948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14944-15556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14944-15556 bp Feature: gene Location: 16071-16283 bp Feature: gene Location: 16294-16797 bp Feature: domain Description: DDE_Tnp_IS1 Location: 16405-16795 bp Feature: domain Description: DDE_Tnp_IS1 Location: 16405-16795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)