myRT

myRT report for GCA_900086625.1_PRJEB13961

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Seq: FLKL01000002.1 (4143223 bp)
Overview 1 RT 1: 524868-529282 bp 2 RT 2: 1469294-1475119 bp 3 RT 3: 1932069-1937910 bp 4 RT 4: 2773300-2777062 bp 5 RT 5: 3844873-3849981 bp Neighborhood of RT #1 [524868, 529437] Doc RVT-GII GIIM Methyltransf_24 Neighborhood of RT #2 [1469294, 1475469] ADPRase_NUDT5 RVT-GII GIIM UPF0547 zinc_ribbon_2 TssO Neighborhood of RT #3 [1932069, 1937921] recX RNase_Y RVT-GII GIIM BaeS Neighborhood of RT #4 [2773300, 2777265] NTP-PPase_RS21-C6_like GIY-YIG_COG3410 DUF2075 RVT-GII GIIM RVT-GII HTH_3 Neighborhood of RT #5 [3844873, 3849981] 2-Hacid_dh_10 FGGY_L-XK RVT-GII GIIM Feature: gene Location: 524868-525209 bp Feature: domain Description: Doc Location: 524874-525195 bp Feature: domain Description: Doc Location: 524874-5251 95 bp Feature: gene Location: 525557-525694 bp Feature: gene Location: 526051-527343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526252-526870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526252-526870 bp Feature: domain Description: GIIM Note: maturase Location: 526924-527134 bp Feature: domain Description: GIIM Note: maturase Location: 526924-5271 34 bp Feature: gene Location: 527456-527824 bp Feature: gene Location: 528448-529437 bp Feature: domain Description: Methyltransf_24 Location: 528997-529282 bp Feature: domain Description: Methyltransf_24 Location: 528997-529282 bp Feature: gene Location: 1469294-1470670 bp Feature: gene Location: 1470654-1471139 bp Feature: domain Description: ADPRase_NUDT5 Location: 1470732-1471128 bp Feature: domain Description: ADPRase_NUDT5 Location: 1 470732-1 471 1 28 bp Feature: gene Location: 1471590-1472876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1471881-1472514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 471 881 -1 47251 4 bp Feature: domain Description: GIIM Note: maturase Location: 1472595-1472820 bp Feature: domain Description: GIIM Note: maturase Location: 1 472595-1 472820 bp Feature: gene Location: 1473226-1474377 bp Feature: domain Description: UPF0547 Location: 1473241-1473301 bp Feature: domain Description: UPF0547 Location: 1 473241 -1 473301 bp Feature: gene Location: 1474417-1475469 bp Feature: domain Description: zinc_ribbon_2 Location: 1474426-1474486 bp Feature: domain Description: zinc_ribbon_2 Location: 1 474426-1 474486 bp Feature: domain Description: TssO Location: 1474783-1475119 bp Feature: domain Description: TssO Location: 1 474783-1 4751 1 9 bp Feature: gene Location: 1932069-1932683 bp Feature: domain Description: recX Location: 1932240-1932669 bp Feature: domain Description: recX Location: 1 932240-1 932669 bp Feature: gene Location: 1932756-1934309 bp Feature: domain Description: RNase_Y Location: 1932792-1934307 bp Feature: domain Description: RNase_Y Location: 1 932792-1 934307 bp Feature: gene Location: 1934899-1936185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1935190-1935823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9351 90-1 935823 bp Feature: domain Description: GIIM Note: maturase Location: 1935904-1936129 bp Feature: domain Description: GIIM Note: maturase Location: 1 935904-1 9361 29 bp Feature: gene Location: 1936321-1936452 bp Feature: gene Location: 1936494-1937921 bp Feature: domain Description: BaeS Location: 1936965-1937910 bp Feature: domain Description: BaeS Location: 1 936965-1 93791 0 bp Feature: gene Location: 2773300-2773650 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 2773321-2773570 bp Feature: domain Description: NTP-PPase_RS21 -C6_like Location: 2773321 -2773570 bp Feature: gene Location: 2773696-2775276 bp Feature: domain Description: GIY-YIG_COG3410 Location: 2773762-2773984 bp Feature: domain Description: GIY-YIG_COG341 0 Location: 2773762-2773984 bp Feature: domain Description: DUF2075 Location: 2774209-2775232 bp Feature: domain Description: DUF2075 Location: 2774209-2775232 bp Feature: gene Location: 2775490-2776239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2775493-2775790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2775493-2775790 bp Feature: domain Description: GIIM Note: maturase Location: 2775844-2776069 bp Feature: domain Description: GIIM Note: maturase Location: 2775844-2776069 bp Feature: gene Location: 2776267-2776674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2776375-2776669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2776375-2776669 bp Feature: gene Location: 2776738-2776905 bp Feature: gene Location: 2776924-2777265 bp Feature: domain Description: HTH_3 Location: 2776957-2777062 bp Feature: domain Description: HTH_3 Location: 2776957-2777062 bp Feature: gene Location: 3844873-3845910 bp Feature: domain Description: 2-Hacid_dh_10 Location: 3844882-3845875 bp Feature: domain Description: 2-Hacid_dh_1 0 Location: 3844882-3845875 bp Feature: gene Location: 3845915-3847444 bp Feature: domain Description: FGGY_L-XK Location: 3845924-3847250 bp Feature: domain Description: FGGY_L-XK Location: 3845924-3847250 bp Feature: gene Location: 3847715-3849001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3848006-3848639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3848006-3848639 bp Feature: domain Description: GIIM Note: maturase Location: 3848720-3848945 bp Feature: domain Description: GIIM Note: maturase Location: 3848720-3848945 bp Feature: gene Location: 3849447-3849689 bp Feature: gene Location: 3849724-3849981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Doc (COG3654), RVT-GII, GIIM (pfam08388), Methyltransf_24 (pfam13578), ADPRase_NUDT5 (cd03424), UPF0547 (pfam10571), zinc_ribbon_2 (pfam13240), TssO, recX (PRK14137), RNase_Y (TIGR03319)
BaeS (COG0642), NTP-PPase_RS21-C6_like (cd11537), GIY-YIG_COG3410 (cd10439), DUF2075 (pfam09848), HTH_3 (pfam01381), 2-Hacid_dh_10 (cd12171), FGGY_L-XK (cd07802)