myRT

myRT report for GCA_900086715.1_PRJEB13933

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Seq: FLKH01000011.1 (854682 bp)
Overview 1 RT 1: 80436-85131 bp Neighborhood of RT #1 [80436, 85157] RVT-GII GIIM ZntA TIGR00003 Feature: gene Location: 80436-80612 bp Feature: gene Location: 80971-81132 bp Feature: gene Location: 81371-82543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81479-82094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 479-82094 bp Feature: domain Description: GIIM Note: maturase Location: 82148-82379 bp Feature: domain Description: GIIM Note: maturase Location: 821 48-82379 bp Feature: gene Location: 82850-84730 bp Feature: domain Description: ZntA Location: 82928-84719 bp Feature: domain Description: ZntA Location: 82928-8471 9 bp Feature: gene Location: 84924-85157 bp Feature: domain Description: TIGR00003 Location: 84936-85131 bp Feature: domain Description: TIGR00003 Location: 84936-851 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ZntA (COG2217), TIGR00003 (copper ion binding protein)

Seq: FLKH01000010.1 (691330 bp)
Overview 1 RT 1: 406368-411644 bp 2 RT 2: 531113-532931 bp Neighborhood of RT #1 [406368, 411644] UgpA PBP2_TMBP_like RVT-GII GIIM Neighborhood of RT #2 [531113, 532931] AcrR retropepsin_like_bacteria RVT-GII Feature: gene Location: 406368-407249 bp Feature: domain Description: UgpA Location: 406389-407229 bp Feature: domain Description: UgpA Location: 406389-4072 2 9 bp Feature: gene Location: 407309-408634 bp Feature: domain Description: PBP2_TMBP_like Location: 407438-408590 bp Feature: domain Description: PBP2 _TMBP_like Location: 407438-408590 bp Feature: gene Location: 409325-410593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409544-410168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409544-410168 bp Feature: domain Description: GIIM Note: maturase Location: 410207-410441 bp Feature: domain Description: GIIM Note: maturase Location: 4102 07-410441 bp Feature: gene Location: 410720-410968 bp Feature: gene Location: 411420-411644 bp Feature: gene Location: 531113-531709 bp Feature: domain Description: AcrR Location: 531128-531602 bp Feature: domain Description: AcrR Location: 53112 8-531602 bp Feature: gene Location: 531772-532080 bp Feature: domain Description: retropepsin_like_bacteria Location: 531790-532027 bp Feature: domain Description: retropepsin_like_bacteria Location: 531790-532 02 7 bp Feature: gene Location: 532134-532343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532143-532335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532 143-532 335 bp Feature: gene Location: 532442-532765 bp Feature: gene Location: 532716-532931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UgpA (COG1175), PBP2_TMBP_like (cd13585), RVT-GII, GIIM (pfam08388), AcrR (COG1309), retropepsin_like_bacteria (cd05483)

Seq: FLKH01000009.1 (354498 bp)
Overview 1 RT 1: 293952-297628 bp Neighborhood of RT #1 [293952, 297630] ba3_CcO_II_C RVT-GII GIIM PRK03735 cad Feature: gene Location: 293952-294314 bp Feature: domain Description: ba3_CcO_II_C Location: 294060-294312 bp Feature: domain Description: ba3 _CcO_II_C Location: 294060-2943 12 bp Feature: gene Location: 294691-294939 bp Feature: gene Location: 295066-296334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295285-295909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295285-295909 bp Feature: domain Description: GIIM Note: maturase Location: 295948-296182 bp Feature: domain Description: GIIM Note: maturase Location: 295948-296182 bp Feature: gene Location: 296574-296900 bp Feature: domain Description: PRK03735 Location: 296601-296862 bp Feature: domain Description: PRK03 73 5 Location: 296601-296862 bp Feature: gene Location: 297016-297630 bp Feature: domain Description: cad Location: 297052-297628 bp Feature: domain Description: cad Location: 297052-297628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ba3_CcO_II_C (cd13913), RVT-GII, GIIM (pfam08388), PRK03735 (cytochrome b6; Provisional), cad (TIGR00779)

Seq: FLKH01000012.1 (2217804 bp)
Overview 1 RT 1: 1198716-1205117 bp Neighborhood of RT #1 [1198716, 1205122] PRK03147 RVT-GII GIIM aconitase_1 Feature: gene Location: 1198716-1199324 bp Feature: domain Description: PRK03147 Location: 1198878-1199304 bp Feature: domain Description: PRK0314 7 Location: 1198878-1199304 bp Feature: gene Location: 1199720-1199983 bp Feature: gene Location: 1200536-1201846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1200791-1201484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1200791-12014 84 bp Feature: domain Description: GIIM Note: maturase Location: 1201550-1201772 bp Feature: domain Description: GIIM Note: maturase Location: 1201550-1201772 bp Feature: gene Location: 1201841-1202155 bp Feature: gene Location: 1202420-1205122 bp Feature: domain Description: aconitase_1 Location: 1202474-1205117 bp Feature: domain Description: aconitase_1 Location: 12024 74 -1205117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03147 (thiol-disulfide oxidoreductase ResA), RVT-GII, GIIM (pfam08388), aconitase_1 (TIGR01341)