myRT

myRT report for GCA_900088665.2_ANAPC5

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Seq: FLMD02000116.1 (3335 bp)
Overview 1 RT 1: 1009-2669 bp Neighborhood of RT #1 [1009, 3334] RVT-CRISPR-like Feature: gene Location: 1009-1425 bp Feature: gene Location: 1660-1977 bp Feature: gene Location: 2447-3334 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2450-2669 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2450-2669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FLMD02000273.1 (1649 bp)
Overview 1 RT 1: 544-1634 bp Neighborhood of RT #1 [544, 1648] RVT-CRISPR-like Feature: gene Location: 544-750 bp Feature: gene Location: 795-1445 bp Feature: gene Location: 1499-1648 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1508-1634 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1508-1634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FLMD02000154.1 (2371 bp)
Overview 1 RT 1: 2-1532 bp Neighborhood of RT #1 [2, 2161] RVT-CRISPR-like Feature: gene Location: 2-2161 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 887-1532 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 887-153 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FLMD02000123.1 (3053 bp)
Overview 1 RT 1: 3-2985 bp Neighborhood of RT #1 [3, 3050] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 3-1307 bp Feature: gene Location: 1436-1615 bp Feature: gene Location: 1776-3050 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1809-2253 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1809-2253 bp Feature: domain Description: GIY-YIG_PLEs Location: 2745-2985 bp Feature: domain Description: GIY-YIG_PLEs Location: 274 5-2985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17/RVT-GII/RVT-UG3/RVT-UG10(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: FLMD02000122.1 (3086 bp)
Overview 1 RT 1: 3-2172 bp Neighborhood of RT #1 [3, 2942] R1-I-EN RVT-UNC Feature: gene Location: 3-2942 bp Feature: domain Description: R1-I-EN Location: 57-693 bp Feature: domain Description: R1-I-EN Location: 5 7-693 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1512-2172 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 15 12-2172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII/RVT-CRISPR/RVT-UG11(RVT-UNC)

Seq: FLMD02000093.1 (4445 bp)
Overview 1 RT 1: 1-3811 bp Neighborhood of RT #1 [1, 4443] retropepsin_like_LTR_2 RVT-UNC RT_RNaseH_2 Integrase_H2C2 rve Feature: gene Location: 1-2238 bp Feature: domain Description: retropepsin_like_LTR_2 Location: 1111-1360 bp Feature: domain Description: retropepsin_like_LTR_2 Location: 1111-136 0 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1966-2107 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 196 6 -2107 bp Feature: gene Location: 2332-4443 bp Feature: domain Description: RT_RNaseH_2 Location: 2545-2842 bp Feature: domain Description: RT_RNaseH_2 Location: 2545-2842 bp Feature: domain Description: Integrase_H2C2 Location: 3292-3451 bp Feature: domain Description: Integrase_H2C2 Location: 3292-3451 bp Feature: domain Description: rve Location: 3496-3811 bp Feature: domain Description: rve Location: 3496 -3811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like_LTR_2 (cd05484), RVT-UG26/RVT-GII/RVT-UG10(RVT-UNC), RT_RNaseH_2 (pfam17919), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: FLMD02000209.1 (1935 bp)
Overview 1 RT 1: 3-1854 bp Neighborhood of RT #1 [3, 1934] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 3-1934 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 279-411 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 27 9-411 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 726-1086 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 7 26-1086 bp Feature: domain Description: Integrase_H2C2 Location: 1332-1488 bp Feature: domain Description: Integrase_H2C2 Location: 1332-1488 bp Feature: domain Description: rve Location: 1569-1854 bp Feature: domain Description: rve Location: 1569-1854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-UG20/RVT-UG11/RVT-UNC(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: FLMD02000223.1 (1844 bp)
Overview 1 RT 1: 128-1442 bp Neighborhood of RT #1 [128, 1513] RVT-CRISPR-like GIY-YIG_PLEs Feature: gene Location: 128-1513 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 233-650 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 233-650 bp Feature: domain Description: GIY-YIG_PLEs Location: 1205-1442 bp Feature: domain Description: GIY-YIG_PLEs Location: 1205-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIY-YIG_PLEs (cd10442)

Seq: FLMD02000119.1 (3194 bp)
Overview 1 RT 1: 52-3139 bp Neighborhood of RT #1 [52, 3139] Exo_endo_phos_2 RVT-GII Feature: gene Location: 52-2865 bp Feature: domain Description: Exo_endo_phos_2 Location: 385-685 bp Feature: domain Description: Exo_endo_phos_2 Location: 385-685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588-2212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588-2212 bp Feature: gene Location: 3002-3139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-GII

Seq: FLMD02000229.1 (1809 bp)
Overview 1 RT 1: 479-1607 bp Neighborhood of RT #1 [479, 1630] RVT-GII Feature: gene Location: 479-895 bp Feature: gene Location: 1105-1281 bp Feature: gene Location: 1370-1630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1430-1607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1430-1607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FLMD02000263.1 (1708 bp)
Overview 1 RT 1: 2-1016 bp Neighborhood of RT #1 [2, 1708] RVT-GII Feature: gene Location: 2-1708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 410-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 410-1016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FLMD02000158.1 (2334 bp)
Overview 1 RT 1: 1-1076 bp Neighborhood of RT #1 [1, 1076] RVT-DGRs RT_RNaseH_2 Feature: gene Location: 1-279 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52-205 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52-205 bp Feature: gene Location: 491-667 bp Feature: domain Description: RT_RNaseH_2 Location: 530-650 bp Feature: domain Description: RT_RNaseH_2 Location: 530-650 bp Feature: gene Location: 852-1076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RT_RNaseH_2 (pfam17919)

Seq: FLMD02000242.1 (1738 bp)
Overview 1 RT 1: 3-1350 bp Neighborhood of RT #1 [3, 1430] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 3-422 bp Feature: gene Location: 351-1430 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 354-486 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 354-486 bp Feature: domain Description: GIY-YIG_PLEs Location: 1110-1350 bp Feature: domain Description: GIY-YIG_PLEs Location: 1110-13 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8/RVT-UG12/RVT-CRISPR(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: FLMD02000298.1 (1569 bp)
Overview 1 RT 1: 1-1540 bp Neighborhood of RT #1 [1, 1566] RVT-CRISPR-like GIY-YIG_PLEs Feature: gene Location: 1-1566 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 304-679 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 304-679 bp Feature: domain Description: GIY-YIG_PLEs Location: 1300-1540 bp Feature: domain Description: GIY-YIG_PLEs Location: 1300-1540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIY-YIG_PLEs (cd10442)

Seq: FLMD02000087.1 (5062 bp)
Overview 1 RT 1: 1-4921 bp Neighborhood of RT #1 [1, 4921] R1-I-EN RVT-GII Rnase_HI_RT_non_LTR Feature: gene Location: 1-3426 bp Feature: domain Description: R1-I-EN Location: 16-562 bp Feature: domain Description: R1-I-EN Location: 16-562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372-2038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372-2038 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 2737-3112 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 2737-3112 bp Feature: gene Location: 3527-4921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII, Rnase_HI_RT_non_LTR (cd09276)

Seq: FLMD02000280.1 (1635 bp)
Overview 1 RT 1: 43-979 bp Neighborhood of RT #1 [43, 1632] RVT-UNC Feature: gene Location: 43-1632 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 337-979 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 337-979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)