myRT

myRT report for GCA_900089845.1_VhemicentrotiCECT8714_SPAdes_Prokka

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Seq: FLQQ01000006.1 (323861 bp)
Overview 1 RT 1: 268154-272797 bp Neighborhood of RT #1 [268154, 273021] COG2932 RPL43A RVT-UG16 DDE_Tnp_1 Feature: gene Location: 268154-268681 bp Feature: domain Description: COG2932 Location: 268256-268655 bp Feature: domain Description: COG2932 Location: 268256-268655 bp Feature: gene Location: 268997-269356 bp Feature: domain Description: RPL43A Location: 269033-269177 bp Feature: domain Description: RPL43A Location: 269033-2691 77 bp Feature: gene Location: 269438-270913 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 269807-270209 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 269807-270209 bp Feature: gene Location: 271031-271678 bp Feature: gene Location: 271780-273021 bp Feature: domain Description: DDE_Tnp_1 Location: 272101-272797 bp Feature: domain Description: DDE_Tnp_1 Location: 2721 01 -272797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), RPL43A (COG1997), RVT-UG16, DDE_Tnp_1 (pfam01609)

Seq: FLQQ01000037.1 (1895 bp)
Overview 1 RT 1: 37-1824 bp Neighborhood of RT #1 [37, 1824] RVT-GII GIIM Feature: gene Location: 37-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256-868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56-868 bp Feature: domain Description: GIIM Note: maturase Location: 922-1126 bp Feature: domain Description: GIIM Note: maturase Location: 92 2 -112 6 bp Feature: gene Location: 1522-1824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)