myRT

myRT report for GCA_900091805.1_IMG-taxon_2657245712_annotated_assembly

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Seq: FMCG01000386.1 (2228 bp)
Overview 1 RT 1: 1-2228 bp Neighborhood of RT #1 [1, 2227] DUF4096 RVT-GII GIIM DDE_5 Feature: gene Location: 1-534 bp Feature: domain Description: DUF4096 Location: 55-265 bp Feature: domain Description: DUF4096 Location: 55-265 bp Feature: gene Location: 578-2044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908-1277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908-1 277 bp Feature: domain Description: GIIM Note: maturase Location: 1337-1565 bp Feature: domain Description: GIIM Note: maturase Location: 1 337-1 565 bp Feature: gene Location: 1772-2227 bp Feature: domain Description: DDE_5 Location: 1856-2228 bp Feature: domain Description: DDE_5 Location: 1 856-2228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546)

Seq: FMCG01000357.1 (5206 bp)
Overview 1 RT 1: 3-4924 bp Neighborhood of RT #1 [3, 5016] DUF839 RVT-GII GIIM RVT-GII GIIM RVT-GII InsQ Feature: gene Location: 3-305 bp Feature: domain Description: DUF839 Location: 42-270 bp Feature: domain Description: DUF839 Location: 42 -2 70 bp Feature: gene Location: 534-1631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 618-1197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 618-1197 bp Feature: domain Description: GIIM Note: maturase Location: 1269-1491 bp Feature: domain Description: GIIM Note: maturase Location: 12 69-1491 bp Feature: gene Location: 1677-3146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031-2718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 031-2 718 bp Feature: domain Description: GIIM Note: maturase Location: 2787-3021 bp Feature: domain Description: GIIM Note: maturase Location: 2 787-302 1 bp Feature: gene Location: 3236-3436 bp Feature: gene Location: 3541-4161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3877-3997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3877-3997 bp Feature: gene Location: 4660-5016 bp Feature: domain Description: InsQ Location: 4663-4924 bp Feature: domain Description: InsQ Location: 4663-492 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF839 (pfam05787), RVT-GII, GIIM (pfam08388), InsQ (COG0675)

Seq: FMCG01000373.1 (2561 bp)
Overview 1 RT 1: 1-2502 bp Neighborhood of RT #1 [1, 2558] RVT_N RVT-GII DDE_5 Feature: gene Location: 1-1068 bp Feature: domain Description: RVT_N Location: 43-280 bp Feature: domain Description: RVT_N Location: 43 -280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340-625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 40-625 bp Feature: gene Location: 1926-2558 bp Feature: domain Description: DDE_5 Location: 1992-2502 bp Feature: domain Description: DDE_5 Location: 1992-2502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, DDE_5 (pfam13546)

Seq: FMCG01000382.1 (2274 bp)
Overview 1 RT 1: 1-2173 bp Neighborhood of RT #1 [1, 2196] PHA02517 RVT-GII GIIM InsE Feature: gene Location: 1-432 bp Feature: domain Description: PHA02517 Location: 7-382 bp Feature: domain Description: PHA02517 Location: 7-382 bp Feature: gene Location: 521-1846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 869-1484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 869-14 84 bp Feature: domain Description: GIIM Note: maturase Location: 1541-1754 bp Feature: domain Description: GIIM Note: maturase Location: 154 1-1754 bp Feature: gene Location: 1885-2196 bp Feature: domain Description: InsE Location: 1900-2173 bp Feature: domain Description: InsE Location: 1900-2173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)