myRT

myRT report for GCA_900093055.1_18090_8_73

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Seq: FLVQ01000077.1 (2648 bp)
Overview 1 RT 1: 78-2625 bp Neighborhood of RT #1 [78, 2625] RVT-GII GIIM Feature: gene Location: 78-284 bp Feature: gene Location: 371-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 644-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 644-1 376 bp Feature: domain Description: GIIM Note: maturase Location: 1451-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1 451 -1 649 bp Feature: gene Location: 2188-2625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FLVQ01000005.1 (304440 bp)
Overview 1 RT 1: 265203-272071 bp Neighborhood of RT #1 [265203, 272073] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 265203-265931 bp Feature: domain Description: FimC Location: 265236-265914 bp Feature: domain Description: FimC Location: 2 652 36-2 65914 bp Feature: gene Location: 265963-268572 bp Feature: domain Description: FimD Location: 266020-268561 bp Feature: domain Description: FimD Location: 2 6602 0-2 68561 bp Feature: gene Location: 268572-270650 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268980-269424 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 68980-2 6942 4 bp Feature: gene Location: 270707-271147 bp Feature: domain Description: Integrase_1 Location: 270713-270929 bp Feature: domain Description: Integrase_1 Location: 2 70713-2 7092 9 bp Feature: gene Location: 271408-272073 bp Feature: domain Description: INT_P4_C Location: 271513-272071 bp Feature: domain Description: INT_P4_C Location: 2 71513-2 72 071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FLVQ01000023.1 (58578 bp)
Overview 1 RT 1: 30432-34867 bp Neighborhood of RT #1 [30432, 34929] DinI RVT-GII NifQ nifB Feature: gene Location: 30432-30674 bp Feature: domain Description: DinI Location: 30483-30663 bp Feature: domain Description: DinI Location: 3 0483 -3 0663 bp Feature: gene Location: 30689-30835 bp Feature: gene Location: 31288-32775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31693-32383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1693 -3 23 83 bp Feature: gene Location: 33014-33523 bp Feature: domain Description: NifQ Location: 33032-33512 bp Feature: domain Description: NifQ Location: 3 3 03 2-3 3 512 bp Feature: gene Location: 33523-34929 bp Feature: domain Description: nifB Location: 33595-34867 bp Feature: domain Description: nifB Location: 3 3 595-3 4867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, NifQ (pfam04891), nifB (TIGR01290)