myRT

myRT report for GCA_900093275.1_18090_8_75

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Seq: FLVK01000005.1 (440513 bp)
Overview 1 RT 1: 3-3017 bp Neighborhood of RT #1 [3, 3019] RVT-GII PRK10276 umuC Feature: gene Location: 3-131 bp Feature: gene Location: 243-1253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249-861 bp Feature: gene Location: 1332-1751 bp Feature: domain Description: PRK10276 Location: 1335-1746 bp Feature: domain Description: PRK1 0276 Location: 1 335-1 746 bp Feature: gene Location: 1754-3019 bp Feature: domain Description: umuC Location: 1757-3017 bp Feature: domain Description: umuC Location: 1 757-301 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: FLVK01000003.1 (745793 bp)
Overview 1 RT 1: 461047-467900 bp Neighborhood of RT #1 [461047, 467917] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 461047-461712 bp Feature: domain Description: INT_P4_C Location: 461152-461710 bp Feature: domain Description: INT_P4_C Location: 461152 -461710 bp Feature: gene Location: 461973-462413 bp Feature: domain Description: Integrase_1 Location: 461979-462195 bp Feature: domain Description: Integrase_1 Location: 461979-462 195 bp Feature: gene Location: 462470-464548 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 462878-463322 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 462 878-46332 2 bp Feature: gene Location: 464548-467157 bp Feature: domain Description: FimD Location: 464605-467146 bp Feature: domain Description: FimD Location: 464605-467146 bp Feature: gene Location: 467189-467917 bp Feature: domain Description: FimC Location: 467237-467900 bp Feature: domain Description: FimC Location: 4672 37-467900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FLVK01000002.1 (997353 bp)
Overview 1 RT 1: 919078-922943 bp Neighborhood of RT #1 [919078, 922943] umuC PRK10276 RVT-GII Feature: gene Location: 919078-920343 bp Feature: domain Description: umuC Location: 919081-920341 bp Feature: domain Description: umuC Location: 919081-9203 41 bp Feature: gene Location: 920345-920764 bp Feature: domain Description: PRK10276 Location: 920348-920759 bp Feature: domain Description: PRK10276 Location: 9203 48-920759 bp Feature: gene Location: 920844-922328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921246-921936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921246-92193 6 bp Feature: gene Location: 922337-922504 bp Feature: gene Location: 922770-922943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII