myRT

myRT report for GCA_900093815.1_18090_8_78

Download annotations/find similar RTs

Seq: FLYQ01000021.1 (10396 bp)
Overview 1 RT 1: 1562-4990 bp Neighborhood of RT #1 [1562, 5007] PinE PRiA4_ORF3 RVT-GII PRK10276 Feature: gene Location: 1562-2134 bp Feature: domain Description: PinE Location: 1568-2108 bp Feature: domain Description: PinE Location: 1 568-21 08 bp Feature: gene Location: 2271-2861 bp Feature: domain Description: PRiA4_ORF3 Location: 2277-2772 bp Feature: domain Description: PRiA4_ORF3 Location: 2277-2772 bp Feature: gene Location: 2944-3693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2950-3562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2950-3562 bp Feature: gene Location: 3668-4270 bp Feature: gene Location: 4324-5007 bp Feature: domain Description: PRK10276 Location: 4627-4990 bp Feature: domain Description: PRK1 0276 Location: 4627-4990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRiA4_ORF3 (pfam07929), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FLYQ01000006.1 (447267 bp)
Overview 1 RT 1: 418543-421618 bp Neighborhood of RT #1 [418543, 421623] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 418543-418761 bp Feature: domain Description: PRK09678 Location: 418546-418744 bp Feature: domain Description: PRK09678 Location: 418546-418744 bp Feature: gene Location: 419008-419196 bp Feature: gene Location: 419639-419938 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 419642-419753 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 419642 -419753 bp Feature: gene Location: 420554-421036 bp Feature: domain Description: SmpB Location: 420584-421028 bp Feature: domain Description: SmpB Location: 42 0584-42 102 8 bp Feature: gene Location: 421186-421623 bp Feature: domain Description: PRK10724 Location: 421189-421618 bp Feature: domain Description: PRK1072 4 Location: 42 1189-42 1618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)