myRT

myRT report for GCA_900093925.1_scaffolds_20151473

Download annotations/find similar RTs

Seq: FLZC01000002.1 (245611 bp)
Overview 1 RT 1: 213740-218585 bp Neighborhood of RT #1 [213740, 218585] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 213740-215173 bp Feature: domain Description: DUF3987 Location: 213833-214910 bp Feature: domain Description: DUF3987 Location: 21 3833-21 491 0 bp Feature: gene Location: 216031-216594 bp Feature: domain Description: Inovirus_Gp2 Location: 216088-216529 bp Feature: domain Description: Inovirus_Gp2 Location: 21 6088-21 6529 bp Feature: gene Location: 216920-218083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217034-217721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 7034-21 7721 bp Feature: gene Location: 218070-218378 bp Feature: gene Location: 218412-218585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII

Seq: FLZC01000024.1 (62889 bp)
Overview 1 RT 1: 40077-49537 bp Neighborhood of RT #1 [40077, 49764] RVT-UG7 PRK09692 DUF4062 HTH_XRE RVT-Retrons Resolvase Feature: gene Location: 40077-40217 bp Feature: gene Location: 40327-41067 bp Feature: gene Location: 41064-42692 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 41472-41901 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 41472 -41901 bp Feature: gene Location: 42685-43869 bp Feature: domain Description: PRK09692 Location: 42691-43846 bp Feature: domain Description: PRK09692 Location: 42 691-43846 bp Feature: gene Location: 44578-45759 bp Feature: domain Description: DUF4062 Location: 44593-44920 bp Feature: domain Description: DUF4062 Location: 44593-4492 0 bp Feature: gene Location: 45790-46251 bp Feature: domain Description: HTH_XRE Location: 45820-45988 bp Feature: domain Description: HTH_XRE Location: 4582 0-45988 bp Feature: gene Location: 46491-46988 bp Feature: gene Location: 47125-48831 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47275-47872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 472 75-47872 bp Feature: gene Location: 48868-49050 bp Feature: gene Location: 49099-49764 bp Feature: domain Description: Resolvase Location: 49120-49537 bp Feature: domain Description: Resolvase Location: 4912 0-49537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), DUF4062 (pfam13271), HTH_XRE (smart00530), RVT-Retrons, Resolvase (smart00857)

Seq: FLZC01000060.1 (12355 bp)
Overview 1 RT 1: 130-5822 bp Neighborhood of RT #1 [130, 6280] InsE PHA02517 RVT-GII GIIM PHA02517 HsdM Feature: gene Location: 130-456 bp Feature: domain Description: InsE Location: 133-454 bp Feature: domain Description: InsE Location: 13 3 -454 bp Feature: gene Location: 456-935 bp Feature: domain Description: PHA02517 Location: 516-870 bp Feature: domain Description: PHA02517 Location: 516-870 bp Feature: gene Location: 1704-3050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1800-2532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1800-253 2 bp Feature: domain Description: GIIM Note: maturase Location: 2607-2805 bp Feature: domain Description: GIIM Note: maturase Location: 2607-2805 bp Feature: gene Location: 3245-3598 bp Feature: domain Description: PHA02517 Location: 3248-3593 bp Feature: domain Description: PHA02517 Location: 3 248-3 593 bp Feature: gene Location: 3821-6280 bp Feature: domain Description: HsdM Location: 3878-5822 bp Feature: domain Description: HsdM Location: 3 878-5822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286)