myRT

myRT report for GCA_900093945.1_scaffolds_20151316

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Seq: FLZL01000028.1 (53409 bp)
Overview 1 RT 1: 30601-40061 bp Neighborhood of RT #1 [30601, 40288] RVT-UG7 PRK09692 DUF4062 HTH_XRE RVT-Retrons Resolvase Feature: gene Location: 30601-30741 bp Feature: gene Location: 30851-31591 bp Feature: gene Location: 31588-33216 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 31996-32425 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 31 996-32425 bp Feature: gene Location: 33209-34393 bp Feature: domain Description: PRK09692 Location: 33215-34370 bp Feature: domain Description: PRK09692 Location: 3321 5-34370 bp Feature: gene Location: 35102-36283 bp Feature: domain Description: DUF4062 Location: 35117-35444 bp Feature: domain Description: DUF4062 Location: 351 1 7-35444 bp Feature: gene Location: 36314-36775 bp Feature: domain Description: HTH_XRE Location: 36344-36512 bp Feature: domain Description: HTH_XRE Location: 36344-3651 2 bp Feature: gene Location: 37015-37512 bp Feature: gene Location: 37649-39355 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37799-38396 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37799-38396 bp Feature: gene Location: 39392-39574 bp Feature: gene Location: 39623-40288 bp Feature: domain Description: Resolvase Location: 39644-40061 bp Feature: domain Description: Resolvase Location: 39644-40061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), DUF4062 (pfam13271), HTH_XRE (smart00530), RVT-Retrons, Resolvase (smart00857)

Seq: FLZL01000051.1 (23617 bp)
Overview 1 RT 1: 11392-17084 bp Neighborhood of RT #1 [11392, 17542] InsE PHA02517 RVT-GII GIIM PHA02517 HsdM Feature: gene Location: 11392-11718 bp Feature: domain Description: InsE Location: 11395-11716 bp Feature: domain Description: InsE Location: 11395-11716 bp Feature: gene Location: 11718-12197 bp Feature: domain Description: PHA02517 Location: 11778-12132 bp Feature: domain Description: PHA02 517 Location: 11778-12 132 bp Feature: gene Location: 12966-14312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13062-13794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13062 -13794 bp Feature: domain Description: GIIM Note: maturase Location: 13869-14067 bp Feature: domain Description: GIIM Note: maturase Location: 13869-14067 bp Feature: gene Location: 14477-14860 bp Feature: domain Description: PHA02517 Location: 14480-14855 bp Feature: domain Description: PHA02 517 Location: 14480-14855 bp Feature: gene Location: 15083-17542 bp Feature: domain Description: HsdM Location: 15140-17084 bp Feature: domain Description: HsdM Location: 15140-17084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286)