myRT

myRT report for GCA_900096945.1_IMG-taxon_2675903067_annotated_assembly

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Seq: FMKA01000001.1 (677714 bp)
Overview 1 RT 1: 252934-258583 bp Neighborhood of RT #1 [252934, 258597] xerC PerM RVT-UG26 EcsC DUF2196 Feature: gene Location: 252934-253986 bp Feature: domain Description: xerC Location: 253048-253957 bp Feature: domain Description: xerC Location: 253048-253957 bp Feature: gene Location: 254321-255619 bp Feature: domain Description: PerM Location: 254450-255485 bp Feature: domain Description: PerM Location: 254450-255485 bp Feature: gene Location: 255748-257097 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 256072-256687 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 256072-256687 bp Feature: gene Location: 257517-258371 bp Feature: domain Description: EcsC Location: 257589-258345 bp Feature: domain Description: EcsC Location: 257589-258345 bp Feature: gene Location: 258394-258597 bp Feature: domain Description: DUF2196 Location: 258400-258583 bp Feature: domain Description: DUF21 96 Location: 258400-258583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), PerM (COG0628), RVT-UG26, EcsC (pfam12787), DUF2196 (pfam09962)

Seq: FMKA01000063.1 (10126 bp)
Overview 1 RT 1: 3-4163 bp Neighborhood of RT #1 [3, 4216] RecQ_Zn_bind RVT-GII YesN PRK11360 YesM Feature: gene Location: 3-263 bp Feature: domain Description: RecQ_Zn_bind Location: 105-231 bp Feature: domain Description: RecQ_Zn_bind Location: 105-2 31 bp Feature: gene Location: 294-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-507 bp Feature: gene Location: 682-2295 bp Feature: domain Description: YesN Location: 685-2278 bp Feature: domain Description: YesN Location: 685-2 2 78 bp Feature: gene Location: 2327-4216 bp Feature: domain Description: PRK11360 Location: 2390-2585 bp Feature: domain Description: PRK11360 Location: 2 390-2 585 bp Feature: domain Description: YesM Location: 2870-4163 bp Feature: domain Description: YesM Location: 2 870-4163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecQ_Zn_bind (pfam16124), RVT-GII, YesN (COG4753), PRK11360 (two-component system sensor histidine kinase AtoS), YesM (COG2972)

Seq: FMKA01000013.1 (100306 bp)
Overview 1 RT 1: 61117-66251 bp Neighborhood of RT #1 [61117, 66251] VirD4 RVT-GII KOG4768 VirD4 Feature: gene Location: 61117-61680 bp Feature: domain Description: VirD4 Location: 61324-61630 bp Feature: domain Description: VirD4 Location: 613 24-6163 0 bp Feature: gene Location: 61806-61937 bp Feature: gene Location: 62365-64188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62665-63367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62665-63 3 67 bp Feature: domain Description: KOG4768 Location: 63505-63601 bp Feature: domain Description: KOG4768 Location: 63 505-63 601 bp Feature: gene Location: 64325-65872 bp Feature: domain Description: VirD4 Location: 64340-65459 bp Feature: domain Description: VirD4 Location: 643 40-65459 bp Feature: gene Location: 65889-66251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: FMKA01000089.1 (1891 bp)
Overview 1 RT 1: 507-1587 bp Neighborhood of RT #1 [507, 1811] RVT-GII GIIM Feature: gene Location: 507-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1326 bp Feature: domain Description: GIIM Note: maturase Location: 1380-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1380-1587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)