myRT

myRT report for GCA_900098925.1_PRJEB15625

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Seq: LT622354.1 (114272 bp)
Overview 1 RT 1: 50999-58617 bp Neighborhood of RT #1 [50999, 58617] GatA RVT-GII GIIM RVT-GII GIIM PRK10746 Feature: gene Location: 50999-52408 bp Feature: domain Description: GatA Location: 51002-52352 bp Feature: domain Description: GatA Location: 51 002-52352 bp Feature: gene Location: 52867-53037 bp Feature: gene Location: 53196-54455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53394-54012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53394-5401 2 bp Feature: domain Description: GIIM Note: maturase Location: 54060-54273 bp Feature: domain Description: GIIM Note: maturase Location: 54060-54273 bp Feature: gene Location: 54752-54922 bp Feature: gene Location: 55081-56340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55279-55897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55279-55897 bp Feature: domain Description: GIIM Note: maturase Location: 55945-56158 bp Feature: domain Description: GIIM Note: maturase Location: 55945-561 58 bp Feature: gene Location: 56607-57995 bp Feature: domain Description: PRK10746 Location: 56616-57966 bp Feature: domain Description: PRK1 0746 Location: 5661 6-57966 bp Feature: gene Location: 58078-58617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622352.1 (287761 bp)
Overview 1 RT 1: 7-2916 bp Neighborhood of RT #1 [7, 2933] RVT-GII GIIM BrkB Feature: gene Location: 7-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 05-82 3 bp Feature: domain Description: GIIM Note: maturase Location: 871-1084 bp Feature: domain Description: GIIM Note: maturase Location: 871-1084 bp Feature: gene Location: 1425-1595 bp Feature: gene Location: 2100-2933 bp Feature: domain Description: BrkB Location: 2130-2916 bp Feature: domain Description: BrkB Location: 2 130-2 916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622358.1 (722914 bp)
Overview 1 RT 1: 223-3320 bp 2 RT 2: 54217-61512 bp 3 RT 3: 206333-212187 bp 4 RT 4: 426903-432848 bp 5 RT 5: 534936-540752 bp Neighborhood of RT #1 [223, 3349] RVT-GII GIIM DUF2624 ZnuC Neighborhood of RT #2 [54217, 61514] RVT-GII GIIM RVT-GII GIIM RHOD PRK08115 Neighborhood of RT #3 [206333, 212216] rimI RVT-GII GIIM RVT-GII GIIM YpuF scpA Neighborhood of RT #4 [426903, 433039] PRK03902 RVT-GII GIIM RVT-GII GIIM fabG UbiE Neighborhood of RT #5 [534936, 540784] YtkA RVT-GII GIIM RVT-GII GIIM spore_YkwD IbpA Feature: gene Location: 223-393 bp Feature: gene Location: 552-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-13 68 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1629 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1629 bp Feature: gene Location: 2185-2469 bp Feature: domain Description: DUF2624 Location: 2215-2455 bp Feature: domain Description: DUF2624 Location: 2215-2455 bp Feature: gene Location: 2576-3349 bp Feature: domain Description: ZnuC Location: 2603-3320 bp Feature: domain Description: ZnuC Location: 2603 -3 3 20 bp Feature: gene Location: 54217-54372 bp Feature: gene Location: 54528-54698 bp Feature: gene Location: 54857-56116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55055-55673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55055-55673 bp Feature: domain Description: GIIM Note: maturase Location: 55721-55934 bp Feature: domain Description: GIIM Note: maturase Location: 55721-5593 4 bp Feature: gene Location: 56413-56583 bp Feature: gene Location: 56742-58001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56940-57558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56940-57558 bp Feature: domain Description: GIIM Note: maturase Location: 57606-57819 bp Feature: domain Description: GIIM Note: maturase Location: 57606-57819 bp Feature: gene Location: 58067-58477 bp Feature: domain Description: RHOD Location: 58223-58454 bp Feature: domain Description: RHOD Location: 58223 -58454 bp Feature: gene Location: 58911-61514 bp Feature: domain Description: PRK08115 Location: 58971-61512 bp Feature: domain Description: PRK08115 Location: 58971-61512 bp Feature: gene Location: 206333-206686 bp Feature: domain Description: rimI Location: 206435-206627 bp Feature: domain Description: rimI Location: 20643 5-206627 bp Feature: gene Location: 206948-207118 bp Feature: gene Location: 207277-208536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207475-208093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207475-208093 bp Feature: domain Description: GIIM Note: maturase Location: 208141-208354 bp Feature: domain Description: GIIM Note: maturase Location: 208141-2083 54 bp Feature: gene Location: 208833-209003 bp Feature: gene Location: 209162-210421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209360-209978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2093 60-209978 bp Feature: domain Description: GIIM Note: maturase Location: 210026-210239 bp Feature: domain Description: GIIM Note: maturase Location: 210026-21023 9 bp Feature: gene Location: 210519-211052 bp Feature: domain Description: YpuF Location: 210522-211041 bp Feature: domain Description: YpuF Location: 210522-211041 bp Feature: gene Location: 211449-212216 bp Feature: domain Description: scpA Location: 211452-212187 bp Feature: domain Description: scpA Location: 211452-212187 bp Feature: gene Location: 426903-427346 bp Feature: domain Description: PRK03902 Location: 426921-427338 bp Feature: domain Description: PRK03 902 Location: 426921-4273 3 8 bp Feature: gene Location: 427639-427809 bp Feature: gene Location: 427968-429227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428166-428784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428166-428784 bp Feature: domain Description: GIIM Note: maturase Location: 428832-429045 bp Feature: domain Description: GIIM Note: maturase Location: 42883 2-429045 bp Feature: gene Location: 429524-429694 bp Feature: gene Location: 429853-431112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430051-430669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 0051-43 0669 bp Feature: domain Description: GIIM Note: maturase Location: 430717-430930 bp Feature: domain Description: GIIM Note: maturase Location: 43 0717-43 093 0 bp Feature: gene Location: 431279-432052 bp Feature: domain Description: fabG Location: 431294-432050 bp Feature: domain Description: fabG Location: 43 1294-43 2050 bp Feature: gene Location: 432341-433039 bp Feature: domain Description: UbiE Location: 432479-432848 bp Feature: domain Description: UbiE Location: 43 2479-43 2848 bp Feature: gene Location: 534936-535379 bp Feature: domain Description: YtkA Location: 535014-535260 bp Feature: domain Description: YtkA Location: 53 5014-53 5260 bp Feature: gene Location: 535645-535815 bp Feature: gene Location: 535974-537233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536172-536790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 6172-53 6790 bp Feature: domain Description: GIIM Note: maturase Location: 536838-537051 bp Feature: domain Description: GIIM Note: maturase Location: 53 683 8-53 7051 bp Feature: gene Location: 537530-537700 bp Feature: gene Location: 537859-539118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538057-538675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 8057-53 8675 bp Feature: domain Description: GIIM Note: maturase Location: 538723-538936 bp Feature: domain Description: GIIM Note: maturase Location: 53 8723 -53 893 6 bp Feature: gene Location: 539498-540277 bp Feature: domain Description: spore_YkwD Location: 539906-540272 bp Feature: domain Description: spore_YkwD Location: 53 9906-540272 bp Feature: gene Location: 540326-540784 bp Feature: domain Description: IbpA Location: 540608-540752 bp Feature: domain Description: IbpA Location: 540608-540752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622344.1 (69821 bp)
Overview 1 RT 1: 223-3465 bp Neighborhood of RT #1 [223, 3509] RVT-GII GIIM YaaC Feature: gene Location: 223-393 bp Feature: gene Location: 552-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750-1368 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1629 bp Feature: domain Description: GIIM Note: maturase Location: 14 16-1629 bp Feature: gene Location: 1940-2092 bp Feature: gene Location: 2535-3509 bp Feature: domain Description: YaaC Location: 2568-3465 bp Feature: domain Description: YaaC Location: 2568-34 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622359.1 (895526 bp)
Overview 1 RT 1: 141531-149193 bp 2 RT 2: 197461-202140 bp 3 RT 3: 215401-220842 bp 4 RT 4: 250116-256711 bp 5 RT 5: 409693-416127 bp 6 RT 6: 613718-618734 bp 7 RT 7: 656024-663359 bp Neighborhood of RT #1 [141531, 149201] AhpF AhpC RVT-GII Intron_maturas2 HNHc ldh M20_Acy1_YhaA-like Neighborhood of RT #2 [197461, 202220] LysR RVT-GII GIIM NfsB_like_nitroreductase TrxB Neighborhood of RT #3 [215401, 220842] RVT-GII GIIM RVT-GII GIIM NarK Neighborhood of RT #4 [250116, 256711] BaeS RVT-GII GIIM PRK09441 Neighborhood of RT #5 [409693, 416168] RVT-GII GIIM RVT-GII GIIM DppD AppF Neighborhood of RT #6 [613718, 619030] smpB RVT-GII GIIM COG3666 DDE_Tnp_1_3 DDE_Tnp_1_6 AcrR Neighborhood of RT #7 [656024, 663391] MdoB RVT-GII GIIM RVT-GII GIIM PRK06201 Mn_catalase Feature: gene Location: 141531-143060 bp Feature: domain Description: AhpF Location: 141537-143058 bp Feature: domain Description: AhpF Location: 1415 37-14305 8 bp Feature: gene Location: 143073-143636 bp Feature: domain Description: AhpC Location: 143076-143634 bp Feature: domain Description: AhpC Location: 143076-143634 bp Feature: gene Location: 144739-146580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145027-145858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145 027-145 85 8 bp Feature: domain Description: Intron_maturas2 Location: 146032-146275 bp Feature: domain Description: Intron_maturas2 Location: 146032-146275 bp Feature: domain Description: HNHc Note: nucleases Location: 146401-146566 bp Feature: domain Description: HNHc Note: nucleases Location: 146401-1465 66 bp Feature: gene Location: 146928-147905 bp Feature: domain Description: ldh Location: 146964-147897 bp Feature: domain Description: ldh Location: 146964-147897 bp Feature: gene Location: 148059-149201 bp Feature: domain Description: M20_Acy1_YhaA-like Location: 148071-149193 bp Feature: domain Description: M20_Acy1_YhaA-like Location: 148071-149193 bp Feature: gene Location: 197461-198372 bp Feature: domain Description: LysR Location: 197464-198349 bp Feature: domain Description: LysR Location: 197464-198349 bp Feature: gene Location: 198646-198816 bp Feature: gene Location: 198975-200234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199173-199791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199173-199791 bp Feature: domain Description: GIIM Note: maturase Location: 199839-200052 bp Feature: domain Description: GIIM Note: maturase Location: 199839-20005 2 bp Feature: gene Location: 200311-200991 bp Feature: domain Description: NfsB_like_nitroreductase Location: 200350-200977 bp Feature: domain Description: NfsB_like_nitroreductase Location: 20035 0-200977 bp Feature: gene Location: 201171-202220 bp Feature: domain Description: TrxB Location: 201186-202140 bp Feature: domain Description: TrxB Location: 201186-202140 bp Feature: gene Location: 215401-215559 bp Feature: gene Location: 215755-215925 bp Feature: gene Location: 216084-217343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216282-216900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216282-216900 bp Feature: domain Description: GIIM Note: maturase Location: 216948-217161 bp Feature: domain Description: GIIM Note: maturase Location: 216948-217161 bp Feature: gene Location: 217640-217810 bp Feature: gene Location: 217969-219228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218167-218785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218167-218785 bp Feature: domain Description: GIIM Note: maturase Location: 218833-219046 bp Feature: domain Description: GIIM Note: maturase Location: 218833-219046 bp Feature: gene Location: 219320-220522 bp Feature: domain Description: NarK Location: 219344-220493 bp Feature: domain Description: NarK Location: 219344-220493 bp Feature: gene Location: 220594-220842 bp Feature: gene Location: 250116-252335 bp Feature: domain Description: BaeS Location: 251376-252318 bp Feature: domain Description: BaeS Location: 25 1376-25 2318 bp Feature: gene Location: 252601-252771 bp Feature: gene Location: 252930-254189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253128-253746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 3128-25 3746 bp Feature: domain Description: GIIM Note: maturase Location: 253794-254007 bp Feature: domain Description: GIIM Note: maturase Location: 25 3794-25 4007 bp Feature: gene Location: 254281-255744 bp Feature: domain Description: PRK09441 Location: 254290-255724 bp Feature: domain Description: PRK09441 Location: 25 4290-25 5 724 bp Feature: gene Location: 256559-256711 bp Feature: gene Location: 409693-409962 bp Feature: gene Location: 410487-410657 bp Feature: gene Location: 410816-412075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411014-411632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411014-411632 bp Feature: domain Description: GIIM Note: maturase Location: 411680-411893 bp Feature: domain Description: GIIM Note: maturase Location: 411680-411893 bp Feature: gene Location: 412372-412542 bp Feature: gene Location: 412701-413960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412899-413517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412899-4135 17 bp Feature: domain Description: GIIM Note: maturase Location: 413565-413778 bp Feature: domain Description: GIIM Note: maturase Location: 4135 65 -413778 bp Feature: gene Location: 414215-415219 bp Feature: domain Description: DppD Location: 414230-415175 bp Feature: domain Description: DppD Location: 414230-415 175 bp Feature: gene Location: 415200-416168 bp Feature: domain Description: AppF Location: 415209-416127 bp Feature: domain Description: AppF Location: 415 209-416127 bp Feature: gene Location: 613718-614185 bp Feature: domain Description: smpB Location: 613739-614171 bp Feature: domain Description: smpB Location: 613739-614171 bp Feature: gene Location: 614983-615153 bp Feature: gene Location: 615312-616571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615510-616128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615 5 10-616128 bp Feature: domain Description: GIIM Note: maturase Location: 616176-616389 bp Feature: domain Description: GIIM Note: maturase Location: 616176-616389 bp Feature: gene Location: 616704-618164 bp Feature: domain Description: COG3666 Location: 616851-617289 bp Feature: domain Description: COG3666 Location: 61685 1-617289 bp Feature: domain Description: DDE_Tnp_1_3 Location: 617481-617688 bp Feature: domain Description: DDE_Tnp_1_3 Location: 617481-617688 bp Feature: domain Description: DDE_Tnp_1_6 Location: 617775-618129 bp Feature: domain Description: DDE_Tnp_1_6 Location: 617775 -618129 bp Feature: gene Location: 618455-619030 bp Feature: domain Description: AcrR Location: 618461-618734 bp Feature: domain Description: AcrR Location: 618461-618734 bp Feature: gene Location: 656024-657958 bp Feature: domain Description: MdoB Location: 656054-657935 bp Feature: domain Description: MdoB Location: 65 605 4-65 7935 bp Feature: gene Location: 658222-658392 bp Feature: gene Location: 658551-659810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 658749-659367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65 8749-65 9367 bp Feature: domain Description: GIIM Note: maturase Location: 659415-659628 bp Feature: domain Description: GIIM Note: maturase Location: 65 9415 -65 9628 bp Feature: gene Location: 660107-660277 bp Feature: gene Location: 660436-661695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660634-661252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660634-66125 2 bp Feature: domain Description: GIIM Note: maturase Location: 661300-661513 bp Feature: domain Description: GIIM Note: maturase Location: 661300-6615 13 bp Feature: gene Location: 661769-662395 bp Feature: domain Description: PRK06201 Location: 661781-662321 bp Feature: domain Description: PRK06201 Location: 661781-662321 bp Feature: gene Location: 662549-663391 bp Feature: domain Description: Mn_catalase Location: 662552-663359 bp Feature: domain Description: Mn_catalase Location: 6625 5 2-66335 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622353.1 (36202 bp)
Overview 1 RT 1: 8336-15845 bp Neighborhood of RT #1 [8336, 15883] gltP RVT-GII GIIM RVT-GII GIIM ddl Feature: gene Location: 8336-9706 bp Feature: domain Description: gltP Location: 8444-9671 bp Feature: domain Description: gltP Location: 8444-96 71 bp Feature: gene Location: 9977-10147 bp Feature: gene Location: 10306-11565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10504-11122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10504-11122 bp Feature: domain Description: GIIM Note: maturase Location: 11170-11383 bp Feature: domain Description: GIIM Note: maturase Location: 11170-11383 bp Feature: gene Location: 11862-12032 bp Feature: gene Location: 12191-13450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12389-13007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12389-13007 bp Feature: domain Description: GIIM Note: maturase Location: 13055-13268 bp Feature: domain Description: GIIM Note: maturase Location: 13055-1326 8 bp Feature: gene Location: 13799-14590 bp Feature: gene Location: 14816-15883 bp Feature: domain Description: ddl Location: 14819-15845 bp Feature: domain Description: ddl Location: 14819-15845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622355.1 (104836 bp)
Overview 1 RT 1: 20004-26586 bp 2 RT 2: 61332-69515 bp Neighborhood of RT #1 [20004, 26687] MFS_YfcJ_like RVT-GII GIIM RVT-GII GIIM PRK10621 TrmB Neighborhood of RT #2 [61332, 69559] HflX RVT-GII GIIM RVT-GII GIIM PRK11749 PRK08318 Feature: gene Location: 20004-21215 bp Feature: domain Description: MFS_YfcJ_like Location: 20046-21156 bp Feature: domain Description: MFS_YfcJ_like Location: 20046-21156 bp Feature: gene Location: 21481-21651 bp Feature: gene Location: 21810-23069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22008-22626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22008-22626 bp Feature: domain Description: GIIM Note: maturase Location: 22674-22887 bp Feature: domain Description: GIIM Note: maturase Location: 2267 4-22887 bp Feature: gene Location: 23366-23536 bp Feature: gene Location: 23695-24954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23893-24511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23893-24511 bp Feature: domain Description: GIIM Note: maturase Location: 24559-24772 bp Feature: domain Description: GIIM Note: maturase Location: 24559-247 7 2 bp Feature: gene Location: 25028-25795 bp Feature: domain Description: PRK10621 Location: 25037-25784 bp Feature: domain Description: PRK10621 Location: 25037 -257 84 bp Feature: gene Location: 25890-26687 bp Feature: domain Description: TrmB Location: 25908-26586 bp Feature: domain Description: TrmB Location: 25908-26586 bp Feature: gene Location: 61332-62606 bp Feature: domain Description: HflX Location: 61356-62589 bp Feature: domain Description: HflX Location: 61356-62589 bp Feature: gene Location: 62988-63158 bp Feature: gene Location: 63317-64576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63515-64133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63515-64133 bp Feature: domain Description: GIIM Note: maturase Location: 64181-64394 bp Feature: domain Description: GIIM Note: maturase Location: 64181-64394 bp Feature: gene Location: 64873-65043 bp Feature: gene Location: 65202-66461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65400-66018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65400-66018 bp Feature: domain Description: GIIM Note: maturase Location: 66066-66279 bp Feature: domain Description: GIIM Note: maturase Location: 66066-6627 9 bp Feature: gene Location: 66875-68245 bp Feature: domain Description: PRK11749 Location: 66914-68228 bp Feature: domain Description: PRK117 49 Location: 66914-68228 bp Feature: gene Location: 68273-69559 bp Feature: domain Description: PRK08318 Location: 68276-69515 bp Feature: domain Description: PRK08318 Location: 6827 6-69515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622357.1 (536597 bp)
Overview 1 RT 1: 143765-150350 bp 2 RT 2: 185905-191571 bp 3 RT 3: 384748-392957 bp 4 RT 4: 431075-434658 bp Neighborhood of RT #1 [143765, 150350] YwqE MFS_YfcJ_like RVT-GII GIIM RVT-GII GIIM Neighborhood of RT #2 [185905, 191588] PRK02304 recJ ssDNA-exonuc_C RVT-GII HNHc recJ Neighborhood of RT #3 [384748, 392980] RarD YtcJ RVT-GII GIIM RVT-GII GIIM MACS_like Neighborhood of RT #4 [431075, 434669] TRX_family RVT-GII GIIM PRK03114 Feature: gene Location: 143765-144532 bp Feature: domain Description: YwqE Location: 143768-144530 bp Feature: domain Description: YwqE Location: 143768 -144530 bp Feature: gene Location: 144793-146010 bp Feature: domain Description: MFS_YfcJ_like Location: 144889-145975 bp Feature: domain Description: MFS_YfcJ_like Location: 1448 8 9-145975 bp Feature: gene Location: 146360-147619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146558-147176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146558 -147176 bp Feature: domain Description: GIIM Note: maturase Location: 147224-147437 bp Feature: domain Description: GIIM Note: maturase Location: 147224-147437 bp Feature: gene Location: 147778-147948 bp Feature: gene Location: 148245-149504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148443-149061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148 443-149061 bp Feature: domain Description: GIIM Note: maturase Location: 149109-149322 bp Feature: domain Description: GIIM Note: maturase Location: 149109-149322 bp Feature: gene Location: 149662-149832 bp Feature: gene Location: 150114-150350 bp Feature: gene Location: 185905-186417 bp Feature: domain Description: PRK02304 Location: 185908-186415 bp Feature: domain Description: PRK02304 Location: 18 5908 -18 6415 bp Feature: gene Location: 186408-188552 bp Feature: domain Description: recJ Location: 186459-187866 bp Feature: domain Description: recJ Location: 18 6459-18 78 66 bp Feature: domain Description: ssDNA-exonuc_C Location: 187884-188493 bp Feature: domain Description: ssDNA-exonuc_C Location: 18 78 8 4-18 8 493 bp Feature: gene Location: 188665-190557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188995-189736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18 8 995-18 9736 bp Feature: domain Description: HNHc Note: nucleases Location: 190276-190444 bp Feature: domain Description: HNHc Note: nucleases Location: 190276-190444 bp Feature: gene Location: 190848-191036 bp Feature: gene Location: 191277-191588 bp Feature: domain Description: recJ Location: 191385-191571 bp Feature: domain Description: recJ Location: 19138 5-191571 bp Feature: gene Location: 384748-385797 bp Feature: domain Description: RarD Location: 384880-385735 bp Feature: domain Description: RarD Location: 38 48 8 0-38 5735 bp Feature: gene Location: 385855-387498 bp Feature: domain Description: YtcJ Location: 385864-387451 bp Feature: domain Description: YtcJ Location: 38 58 64-38 7451 bp Feature: gene Location: 387658-388917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387856-388474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38 78 56-38 8 474 bp Feature: domain Description: GIIM Note: maturase Location: 388522-388735 bp Feature: domain Description: GIIM Note: maturase Location: 38 8 522-38 8 735 bp Feature: gene Location: 389076-389246 bp Feature: gene Location: 389543-390802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389741-390359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38 9741-390359 bp Feature: domain Description: GIIM Note: maturase Location: 390407-390620 bp Feature: domain Description: GIIM Note: maturase Location: 390407-390620 bp Feature: gene Location: 390961-391131 bp Feature: gene Location: 391403-392980 bp Feature: domain Description: MACS_like Location: 391532-392957 bp Feature: domain Description: MACS_like Location: 391532-392957 bp Feature: gene Location: 431075-431401 bp Feature: domain Description: TRX_family Location: 431117-431393 bp Feature: domain Description: TRX_family Location: 431117-431393 bp Feature: gene Location: 431622-432131 bp Feature: gene Location: 432395-433681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432668-433283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432668 -43328 3 bp Feature: domain Description: GIIM Note: maturase Location: 433343-433550 bp Feature: domain Description: GIIM Note: maturase Location: 433343-433550 bp Feature: gene Location: 433760-434047 bp Feature: gene Location: 434151-434669 bp Feature: domain Description: PRK03114 Location: 434154-434658 bp Feature: domain Description: PRK03114 Location: 434154-434658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622356.1 (268351 bp)
Overview 1 RT 1: 110707-116181 bp 2 RT 2: 222732-227608 bp Neighborhood of RT #1 [110707, 116210] FmdA RVT-GII GIIM RVT-GII GIIM YvrJ Neighborhood of RT #2 [222732, 227608] RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 110707-110907 bp Feature: gene Location: 111035-111973 bp Feature: domain Description: FmdA Location: 111080-111932 bp Feature: domain Description: FmdA Location: 111080-1119 32 bp Feature: gene Location: 112232-113491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112430-113048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112430-113048 bp Feature: domain Description: GIIM Note: maturase Location: 113096-113309 bp Feature: domain Description: GIIM Note: maturase Location: 11309 6-113309 bp Feature: gene Location: 113650-113820 bp Feature: gene Location: 114117-115376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114315-114933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114315-1149 33 bp Feature: domain Description: GIIM Note: maturase Location: 114981-115194 bp Feature: domain Description: GIIM Note: maturase Location: 1149 81-11519 4 bp Feature: gene Location: 115535-115705 bp Feature: gene Location: 115977-116210 bp Feature: domain Description: YvrJ Location: 116085-116181 bp Feature: domain Description: YvrJ Location: 116085-116181 bp Feature: gene Location: 222732-223343 bp Feature: gene Location: 223438-223668 bp Feature: gene Location: 223734-224993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223932-224550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2239 32-224550 bp Feature: domain Description: GIIM Note: maturase Location: 224598-224811 bp Feature: domain Description: GIIM Note: maturase Location: 22459 8-224811 bp Feature: gene Location: 225152-225322 bp Feature: gene Location: 225619-226878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225817-226435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225817-226435 bp Feature: domain Description: GIIM Note: maturase Location: 226483-226696 bp Feature: domain Description: GIIM Note: maturase Location: 226483-22669 6 bp Feature: gene Location: 227037-227207 bp Feature: gene Location: 227363-227608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT622360.1 (940575 bp)
Overview 1 RT 1: 43258-50632 bp 2 RT 2: 207856-217972 bp 3 RT 3: 368073-372652 bp 4 RT 4: 384096-390555 bp 5 RT 5: 766841-771898 bp 6 RT 6: 920096-925193 bp Neighborhood of RT #1 [43258, 50700] spore_yhbH RVT-GII GIIM RVT-GII GIIM PhoA DUF4352 Neighborhood of RT #2 [207856, 217977] addB_Gpos addA_Gpos RVT-GII Intron_maturas2 addA_Gpos gerPA Neighborhood of RT #3 [368073, 372657] MFS_SV2_like RVT-GII GIIM Fur_reg_FbpA YncA Neighborhood of RT #4 [384096, 390605] M42_glucanase_like RVT-GII GIIM RVT-GII GIIM YzzA PRK01622 Neighborhood of RT #5 [766841, 771898] FDH_like_1 RVT-GII GIIM RVT-GII GIIM Phage_holin_5_1 Neighborhood of RT #6 [920096, 925216] RAYT YuiF RVT-GII GIIM Zn_ADH6 Feature: gene Location: 43258-44430 bp Feature: domain Description: spore_yhbH Location: 43285-44401 bp Feature: domain Description: spore_yhbH Location: 43285-44401 bp Feature: gene Location: 44725-44895 bp Feature: gene Location: 45054-46313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45252-45870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45252-45870 bp Feature: domain Description: GIIM Note: maturase Location: 45918-46131 bp Feature: domain Description: GIIM Note: maturase Location: 45918-46131 bp Feature: gene Location: 46610-46780 bp Feature: gene Location: 46939-48198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47137-47755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47137-47755 bp Feature: domain Description: GIIM Note: maturase Location: 47803-48016 bp Feature: domain Description: GIIM Note: maturase Location: 47803-48016 bp Feature: gene Location: 48547-49950 bp Feature: domain Description: PhoA Location: 48586-49942 bp Feature: domain Description: PhoA Location: 48586-49942 bp Feature: gene Location: 50023-50700 bp Feature: domain Description: DUF4352 Location: 50287-50632 bp Feature: domain Description: DUF4352 Location: 50287-50632 bp Feature: gene Location: 207856-211350 bp Feature: domain Description: addB_Gpos Location: 207859-211342 bp Feature: domain Description: addB_Gpos Location: 207859-211342 bp Feature: gene Location: 211343-212701 bp Feature: domain Description: addA_Gpos Location: 211385-212693 bp Feature: domain Description: addA_Gpos Location: 211385-212693 bp Feature: gene Location: 213265-214908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213553-214384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213553-214384 bp Feature: domain Description: Intron_maturas2 Location: 214558-214756 bp Feature: domain Description: Intron_maturas2 Location: 214558-214756 bp Feature: gene Location: 215336-217621 bp Feature: domain Description: addA_Gpos Location: 215342-217616 bp Feature: domain Description: addA_Gpos Location: 215342-217616 bp Feature: gene Location: 217759-217977 bp Feature: domain Description: gerPA Location: 217762-217972 bp Feature: domain Description: gerPA Location: 217762-217972 bp Feature: gene Location: 368073-369290 bp Feature: domain Description: MFS_SV2_like Location: 368130-369252 bp Feature: domain Description: MFS_SV2_like Location: 368130-369252 bp Feature: gene Location: 369579-369749 bp Feature: gene Location: 369908-371167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370106-370724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37010 6-370724 bp Feature: domain Description: GIIM Note: maturase Location: 370772-370985 bp Feature: domain Description: GIIM Note: maturase Location: 370772-370985 bp Feature: gene Location: 371705-371887 bp Feature: domain Description: Fur_reg_FbpA Location: 371738-371843 bp Feature: domain Description: Fur_reg_FbpA Location: 371738-371843 bp Feature: gene Location: 372157-372657 bp Feature: domain Description: YncA Location: 372181-372652 bp Feature: domain Description: YncA Location: 372181-372652 bp Feature: gene Location: 384096-385193 bp Feature: domain Description: M42_glucanase_like Location: 384174-385176 bp Feature: domain Description: M42_glucanase_like Location: 384174-385176 bp Feature: gene Location: 385469-385639 bp Feature: gene Location: 385798-387057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385996-386614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385996-386614 bp Feature: domain Description: GIIM Note: maturase Location: 386662-386875 bp Feature: domain Description: GIIM Note: maturase Location: 386662-386875 bp Feature: gene Location: 387354-387524 bp Feature: gene Location: 387683-388942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387881-388499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387881-388499 bp Feature: domain Description: GIIM Note: maturase Location: 388547-388760 bp Feature: domain Description: GIIM Note: maturase Location: 388547-388760 bp Feature: gene Location: 389155-389583 bp Feature: domain Description: YzzA Location: 389158-389563 bp Feature: domain Description: YzzA Location: 389158-389563 bp Feature: gene Location: 389826-390605 bp Feature: domain Description: PRK01622 Location: 389841-390555 bp Feature: domain Description: PRK01622 Location: 389841-390555 bp Feature: gene Location: 766841-767344 bp Feature: domain Description: FDH_like_1 Location: 766847-767342 bp Feature: domain Description: FDH_like_1 Location: 766847-767342 bp Feature: gene Location: 767642-767812 bp Feature: gene Location: 767971-769230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768169-768787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768169-768787 bp Feature: domain Description: GIIM Note: maturase Location: 768835-769048 bp Feature: domain Description: GIIM Note: maturase Location: 768835-769048 bp Feature: gene Location: 769527-769697 bp Feature: gene Location: 769856-771115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770054-770672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770054-770672 bp Feature: domain Description: GIIM Note: maturase Location: 770720-770933 bp Feature: domain Description: GIIM Note: maturase Location: 770720-770933 bp Feature: gene Location: 771330-771614 bp Feature: domain Description: Phage_holin_5_1 Location: 771345-771585 bp Feature: domain Description: Phage_holin_5_1 Location: 771345-771585 bp Feature: gene Location: 771770-771898 bp Feature: gene Location: 920096-920638 bp Feature: domain Description: RAYT Location: 920174-920555 bp Feature: domain Description: RAYT Location: 920174-920555 bp Feature: gene Location: 920755-922068 bp Feature: domain Description: YuiF Location: 920758-922066 bp Feature: domain Description: YuiF Location: 920758-922066 bp Feature: gene Location: 922324-923670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922597-923212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922597-923212 bp Feature: domain Description: GIIM Note: maturase Location: 923272-923479 bp Feature: domain Description: GIIM Note: maturase Location: 923272-923479 bp Feature: gene Location: 923749-924036 bp Feature: gene Location: 924146-925216 bp Feature: domain Description: Zn_ADH6 Location: 924149-925193 bp Feature: domain Description: Zn_ADH6 Location: 924149-925193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT