myRT

myRT report for GCA_900099765.1_IMG-taxon_2667527451_annotated_assembly

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Seq: FNDX01000024.1 (88239 bp)
Overview 1 RT 1: 83068-88051 bp Neighborhood of RT #1 [83068, 88110] PurR Tar RVT-GII GIIM Feature: gene Location: 83068-84132 bp Feature: domain Description: PurR Location: 83086-84124 bp Feature: domain Description: PurR Location: 83086-841 24 bp Feature: gene Location: 84309-86519 bp Feature: domain Description: Tar Location: 85227-86472 bp Feature: domain Description: Tar Location: 85227-86472 bp Feature: gene Location: 86818-88110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87118-87751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871 1 8-87751 bp Feature: domain Description: GIIM Note: maturase Location: 87844-88051 bp Feature: domain Description: GIIM Note: maturase Location: 87844-88051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PurR (COG1609), Tar (COG0840), RVT-GII, GIIM (pfam08388)

Seq: FNDX01000006.1 (258788 bp)
Overview 1 RT 1: 151964-156665 bp Neighborhood of RT #1 [151964, 156665] AraC_binding GlxA GanA RVT-CRISPR-like oxido_grp_1 oxido_grp_1 Feature: gene Location: 151964-152842 bp Feature: domain Description: AraC_binding Location: 152060-152318 bp Feature: domain Description: AraC_binding Location: 152 060-152 318 bp Feature: domain Description: GlxA Location: 152417-152825 bp Feature: domain Description: GlxA Location: 152 417-152 82 5 bp Feature: gene Location: 153021-155093 bp Feature: domain Description: GanA Location: 153045-155076 bp Feature: domain Description: GanA Location: 153045-155076 bp Feature: gene Location: 155209-155346 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 155215-155320 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1552 15-15532 0 bp Feature: gene Location: 155377-156324 bp Feature: domain Description: oxido_grp_1 Location: 155401-156130 bp Feature: domain Description: oxido_grp_1 Location: 155401-156130 bp Feature: domain Description: oxido_grp_1 Location: 156160-156307 bp Feature: domain Description: oxido_grp_1 Location: 156160-156307 bp Feature: gene Location: 156321-156665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC_binding (pfam02311), GlxA (COG4977), GanA (COG1874), RVT-CRISPR, oxido_grp_1 (TIGR03558)

Seq: FNDX01000052.1 (41576 bp)
Overview 1 RT 1: 37162-41505 bp Neighborhood of RT #1 [37162, 41505] TIGR01177 PRK08201 RVT-GII GIIM Feature: gene Location: 37162-38163 bp Feature: domain Description: TIGR01177 Location: 37360-38017 bp Feature: domain Description: TIGR01177 Location: 3 73 60-3 8017 bp Feature: gene Location: 38378-39733 bp Feature: domain Description: PRK08201 Location: 38384-39731 bp Feature: domain Description: PRK08201 Location: 3 83 84-3 973 1 bp Feature: gene Location: 39826-41226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40138-40765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4013 8-40765 bp Feature: domain Description: GIIM Note: maturase Location: 40822-41050 bp Feature: domain Description: GIIM Note: maturase Location: 40822-41050 bp Feature: gene Location: 41044-41505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR01177 (putative methyltransferase, TIGR01177 family), PRK08201 (dipeptidase), RVT-GII, GIIM (pfam08388)

Seq: FNDX01000005.1 (265916 bp)
Overview 1 RT 1: 169886-178350 bp Neighborhood of RT #1 [169886, 178361] PBP2_HisK PRK10060 PRK09776 PRK10060 RVT-GII GIIM PleD COG2509 Feature: gene Location: 169886-170029 bp Feature: gene Location: 170318-173422 bp Feature: domain Description: PBP2_HisK Location: 170399-171053 bp Feature: domain Description: PBP2_HisK Location: 170399-171053 bp Feature: domain Description: PRK10060 Location: 171179-171569 bp Feature: domain Description: PRK10060 Location: 171179-171569 bp Feature: domain Description: PRK09776 Location: 171650-172037 bp Feature: domain Description: PRK09776 Location: 171650-172037 bp Feature: domain Description: PRK10060 Location: 172133-173396 bp Feature: domain Description: PRK10060 Location: 172133-173396 bp Feature: gene Location: 173925-175316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174237-174864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174 237-174 864 bp Feature: domain Description: GIIM Note: maturase Location: 174921-175149 bp Feature: domain Description: GIIM Note: maturase Location: 174 921-17514 9 bp Feature: gene Location: 175410-176606 bp Feature: domain Description: PleD Location: 176076-176601 bp Feature: domain Description: PleD Location: 176076-176601 bp Feature: gene Location: 176919-178361 bp Feature: domain Description: COG2509 Location: 176925-178350 bp Feature: domain Description: COG2509 Location: 176925-178350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_HisK (cd13704), PRK10060 (cyclic di-GMP phosphodiesterase), PRK09776 (putative diguanylate cyclase; Provisional), RVT-GII, GIIM (pfam08388), PleD (COG3706), COG2509 (FAD-dependent dehydrogenase )