myRT

myRT report for GCA_900099855.1_IMG-taxon_2654588102_annotated_assembly

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Seq: FNCU01000080.1 (26887 bp)
Overview 1 RT 1: 16524-20075 bp Neighborhood of RT #1 [16524, 20101] PBP1_ABC_uncharacterized_transporter RVT-GII GIIM SnoaL Feature: gene Location: 16524-17486 bp Feature: domain Description: PBP1_ABC_uncharacterized_transporter Location: 16671-17448 bp Feature: domain Description: PBP1 _ABC_uncharacterized_transporter Location: 1 6671 -1 7448 bp Feature: gene Location: 17519-17851 bp Feature: gene Location: 18096-19379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18339-19002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8339-1 9002 bp Feature: domain Description: GIIM Note: maturase Location: 19071-19284 bp Feature: domain Description: GIIM Note: maturase Location: 1 9071 -1 9284 bp Feature: gene Location: 19384-19644 bp Feature: gene Location: 19499-20101 bp Feature: domain Description: SnoaL Location: 19739-20075 bp Feature: domain Description: SnoaL Location: 1 9739-20075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP1_ABC_uncharacterized_transporter, RVT-GII, GIIM (pfam08388), SnoaL (pfam07366)

Seq: FNCU01000055.1 (54459 bp)
Overview 1 RT 1: 47220-53917 bp Neighborhood of RT #1 [47220, 54030] TarH Tar RVT-GII RVT-GII sulfite_DH_soxC Cytochrome_CBB3 Feature: gene Location: 47220-47504 bp Feature: gene Location: 48893-50602 bp Feature: domain Description: TarH Location: 48914-49301 bp Feature: domain Description: TarH Location: 48914-49301 bp Feature: domain Description: Tar Location: 49382-50582 bp Feature: domain Description: Tar Location: 49382 -50582 bp Feature: gene Location: 50703-51308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50835-51279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50835-512 79 bp Feature: gene Location: 51305-51898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51314-51524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51314-5152 4 bp Feature: gene Location: 52233-53504 bp Feature: domain Description: sulfite_DH_soxC Location: 52338-53496 bp Feature: domain Description: sulfite_DH_soxC Location: 52 338-53496 bp Feature: gene Location: 53491-54030 bp Feature: domain Description: Cytochrome_CBB3 Location: 53668-53917 bp Feature: domain Description: Cytochrome_CBB3 Location: 53668-53917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TarH (smart00319), Tar (COG0840), RVT-GII, sulfite_DH_soxC (TIGR04555), Cytochrome_CBB3 (pfam13442)

Seq: FNCU01000093.1 (9341 bp)
Overview 1 RT 1: 1-3426 bp 2 RT 2: 6372-9339 bp Neighborhood of RT #1 [1, 3426] RVT-GII Neighborhood of RT #2 [6372, 9339] rve RVT-GII Feature: gene Location: 1-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430-1120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 0-1120 bp Feature: gene Location: 2433-2882 bp Feature: gene Location: 3256-3426 bp Feature: gene Location: 6372-7856 bp Feature: domain Description: rve Location: 6723-7116 bp Feature: domain Description: rve Location: 6723 -7116 bp Feature: gene Location: 7860-7988 bp Feature: gene Location: 8331-8840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8532-8736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853 2-873 6 bp Feature: gene Location: 9076-9339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve (pfam00665)

Seq: FNCU01000047.1 (68368 bp)
Overview 1 RT 1: 5183-9216 bp Neighborhood of RT #1 [5183, 9221] RVT-GII MEDS PRK11360 Feature: gene Location: 5183-5431 bp Feature: gene Location: 5428-5637 bp Feature: gene Location: 6010-7200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6214-6874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6214 -6874 bp Feature: gene Location: 7227-7523 bp Feature: gene Location: 7749-9221 bp Feature: domain Description: MEDS Location: 7905-8379 bp Feature: domain Description: MEDS Location: 7905-8379 bp Feature: domain Description: PRK11360 Location: 8508-9216 bp Feature: domain Description: PRK11360 Location: 8508-9216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MEDS (pfam14417), PRK11360 (two-component system sensor histidine kinase AtoS)

Seq: FNCU01000001.1 (937657 bp)
Overview 1 RT 1: 382636-389553 bp Neighborhood of RT #1 [382636, 389553] AAA_23 DUF3732 RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 382636-384588 bp Feature: domain Description: AAA_23 Location: 382642-383527 bp Feature: domain Description: AAA_23 Location: 382642-3835 27 bp Feature: domain Description: DUF3732 Location: 384004-384538 bp Feature: domain Description: DUF3732 Location: 384004-3845 38 bp Feature: gene Location: 384712-385053 bp Feature: gene Location: 385118-386515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385454-386072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385 45 4-386072 bp Feature: domain Description: GIIM Note: maturase Location: 386120-386342 bp Feature: domain Description: GIIM Note: maturase Location: 386120-386342 bp Feature: gene Location: 386667-387986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386958-387582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38695 8-3875 82 bp Feature: domain Description: GIIM Note: maturase Location: 387681-387894 bp Feature: domain Description: GIIM Note: maturase Location: 387681-387894 bp Feature: gene Location: 388325-388831 bp Feature: gene Location: 389089-389553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), DUF3732 (pfam12532), RVT-GII, GIIM (pfam08388)