myRT

myRT report for GCA_900100435.1_IMG-taxon_2609459674_annotated_assembly

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Seq: FNEX01000005.1 (384336 bp)
Overview 1 RT 1: 3-4550 bp Neighborhood of RT #1 [3, 4777] RVT-GII GIIM DUF5017 Hepar_II_III Feature: gene Location: 3-158 bp Feature: gene Location: 230-466 bp Feature: gene Location: 547-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751 -1 408 bp Feature: domain Description: GIIM Note: maturase Location: 1492-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1 492-1 699 bp Feature: gene Location: 1968-2846 bp Feature: domain Description: DUF5017 Location: 2001-2529 bp Feature: domain Description: DUF501 7 Location: 2001 -2529 bp Feature: gene Location: 2858-4777 bp Feature: domain Description: Hepar_II_III Location: 4082-4550 bp Feature: domain Description: Hepar_II_III Location: 4082-4550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF5017 (pfam16409), Hepar_II_III (pfam07940)

Seq: FNEX01000022.1 (128735 bp)
Overview 1 RT 1: 117993-120699 bp 2 RT 2: 123314-128733 bp Neighborhood of RT #1 [117993, 120713] DUF4133 RVT-GII GIIM DUF4134 Neighborhood of RT #2 [123314, 128733] PRK11186 DUF4369 TlpA_like_family RVT-GII GIIM Feature: gene Location: 117993-118364 bp Feature: domain Description: DUF4133 Location: 118014-118281 bp Feature: domain Description: DUF4133 Location: 118014-1182 81 bp Feature: gene Location: 118355-118618 bp Feature: gene Location: 118629-119924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118833-119490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118833-119490 bp Feature: domain Description: GIIM Note: maturase Location: 119589-119769 bp Feature: domain Description: GIIM Note: maturase Location: 119589-119769 bp Feature: gene Location: 120078-120293 bp Feature: gene Location: 120447-120713 bp Feature: domain Description: DUF4134 Location: 120522-120699 bp Feature: domain Description: DUF4134 Location: 12 052 2 -12 0699 bp Feature: gene Location: 123314-125374 bp Feature: domain Description: PRK11186 Location: 123434-125372 bp Feature: domain Description: PRK11186 Location: 12 3434-12 5372 bp Feature: gene Location: 125382-126761 bp Feature: domain Description: DUF4369 Location: 125448-125748 bp Feature: domain Description: DUF4369 Location: 12 5448-12 5748 bp Feature: domain Description: TlpA_like_family Location: 126363-126711 bp Feature: domain Description: TlpA_like_family Location: 12 6363-12 6711 bp Feature: gene Location: 126945-128270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127230-127887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 72 30-12 7887 bp Feature: domain Description: GIIM Note: maturase Location: 127971-128175 bp Feature: domain Description: GIIM Note: maturase Location: 12 7971-12 8175 bp Feature: gene Location: 128270-128506 bp Feature: gene Location: 128578-128733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), RVT-GII, GIIM (pfam08388), DUF4134 (pfam13572), PRK11186 (carboxy terminal-processing peptidase), DUF4369 (pfam14289), TlpA_like_family (cd02966)

Seq: FNEX01000027.1 (68196 bp)
Overview 1 RT 1: 152-3623 bp Neighborhood of RT #1 [152, 3793] RVT-GII GIIM SusD Feature: gene Location: 152-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 7-1094 bp Feature: domain Description: GIIM Note: maturase Location: 1178-1382 bp Feature: domain Description: GIIM Note: maturase Location: 1178-13 82 bp Feature: gene Location: 1477-1713 bp Feature: gene Location: 1937-3793 bp Feature: domain Description: SusD Location: 2054-3623 bp Feature: domain Description: SusD Location: 2054-3 623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SusD (NF033071)

Seq: FNEX01000012.1 (232732 bp)
Overview 1 RT 1: 2-3297 bp Neighborhood of RT #1 [2, 3302] RVT-GII CarbopepD_reg_2 ligand_gated_channel TonB-hemlactrns Feature: gene Location: 2-343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-34 4 bp Feature: gene Location: 338-760 bp Feature: gene Location: 969-3302 bp Feature: domain Description: CarbopepD_reg_2 Location: 1089-1344 bp Feature: domain Description: CarbopepD_reg_2 Location: 1089-134 4 bp Feature: domain Description: ligand_gated_channel Location: 1392-1836 bp Feature: domain Description: ligand_gated_channel Location: 1392-1836 bp Feature: domain Description: TonB-hemlactrns Location: 2184-3297 bp Feature: domain Description: TonB-hemlactrns Location: 2184 -3297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, CarbopepD_reg_2 (pfam13715), ligand_gated_channel (cd01347), TonB-hemlactrns (TIGR01786)

Seq: FNEX01000023.1 (102950 bp)
Overview 1 RT 1: 84160-89543 bp Neighborhood of RT #1 [84160, 89543] HATPase_c_3 group_II_RT_mat RVT-UG21 Feature: gene Location: 84160-84978 bp Feature: gene Location: 85052-86965 bp Feature: domain Description: HATPase_c_3 Location: 85127-85502 bp Feature: domain Description: HATPase_c_3 Location: 85 127-85 5 02 bp Feature: gene Location: 87136-88713 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 87154-87403 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8715 4-87403 bp Feature: RT Description: RVT-UG21 Note: UG21 RT Location: 87526-87943 bp Feature: RT Description: RVT-UG21 Note: UG21 RT Location: 875 26-87943 bp Feature: gene Location: 88839-89276 bp Feature: gene Location: 89373-89543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase_c_3 (pfam13589), group_II_RT_mat (TIGR04416), RVT-UG21

Seq: FNEX01000015.1 (197038 bp)
Overview 1 RT 1: 152-3224 bp Neighborhood of RT #1 [152, 3352] RVT-GII GIIM SusD Feature: gene Location: 152-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437-1094 bp Feature: domain Description: GIIM Note: maturase Location: 1178-1382 bp Feature: domain Description: GIIM Note: maturase Location: 1178-1382 bp Feature: gene Location: 1477-1713 bp Feature: gene Location: 1937-3352 bp Feature: domain Description: SusD Location: 2078-3224 bp Feature: domain Description: SusD Location: 2078-3224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SusD (NF033071)