myRT

myRT report for GCA_900100485.1_IMG-taxon_2675903038_annotated_assembly

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Seq: FNDH01000032.1 (32224 bp)
Overview 1 RT 1: 3-2720 bp Neighborhood of RT #1 [3, 2776] RVT-GII SUL1 Feature: gene Location: 3-131 bp Feature: gene Location: 192-797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537-729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537-729 bp Feature: gene Location: 767-1171 bp Feature: gene Location: 1187-2776 bp Feature: domain Description: SUL1 Location: 1241-2720 bp Feature: domain Description: SUL1 Location: 1 241 -2720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SUL1 (COG0659)

Seq: FNDH01000030.1 (33151 bp)
Overview 1 RT 1: 12178-17568 bp Neighborhood of RT #1 [12178, 17568] HU RVT-UG5 RMtype1_S_EcoN10ORF171P_TRD2-CR2_like RMtype1_S_EcoN10ORF171P_TRD2-CR2_like Feature: gene Location: 12178-12456 bp Feature: domain Description: HU Location: 12184-12436 bp Feature: domain Description: HU Location: 12 184-12 436 bp Feature: gene Location: 12599-13225 bp Feature: gene Location: 12981-16022 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13479-13983 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13479-13983 bp Feature: gene Location: 16019-17206 bp Feature: domain Description: RMtype1_S_EcoN10ORF171P_TRD2-CR2_like Location: 16277-16553 bp Feature: domain Description: RMtype1_S_EcoN10ORF171P_TRD2 -CR2 _like Location: 162 77-16553 bp Feature: domain Description: RMtype1_S_EcoN10ORF171P_TRD2-CR2_like Location: 16595-17141 bp Feature: domain Description: RMtype1_S_EcoN10ORF171P_TRD2 -CR2 _like Location: 16595-17141 bp Feature: gene Location: 17203-17568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU (cd13831), RVT-UG5, RMtype1_S_EcoN10ORF171P_TRD2-CR2_like (cd17287)

Seq: FNDH01000125.1 (1142 bp)
Overview 1 RT 1: 520-1141 bp Neighborhood of RT #1 [520, 1140] group_II_RT_mat RVT-GII Feature: gene Location: 520-786 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 604-784 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 604-784 bp Feature: gene Location: 796-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: FNDH01000133.1 (1022 bp)
Overview 1 RT 1: 2-827 bp Neighborhood of RT #1 [2, 827] RVT-GII GIIM Feature: gene Location: 2-610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-212 bp Feature: domain Description: GIIM Note: maturase Location: 266-470 bp Feature: domain Description: GIIM Note: maturase Location: 266-4 70 bp Feature: gene Location: 645-827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)